Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 KRT8P49-201ENST00000604166 1432 ntBASIC11□□□□□ -0.65
RTL8CO15255 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
RTL8CO15255 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
RTL8CO15255 BTBD7P1-201ENST00000447253 1453 ntBASIC11□□□□□ -0.65
RTL8CO15255 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
RTL8CO15255 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RTL8CO15255 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RTL8CO15255 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RTL8CO15255 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC10.99□□□□□ -0.65
RTL8CO15255 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC10.99□□□□□ -0.65
RTL8CO15255 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
RTL8CO15255 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC10.99□□□□□ -0.65
RTL8CO15255 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC10.99□□□□□ -0.65
RTL8CO15255 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
RTL8CO15255 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC10.99□□□□□ -0.65
RTL8CO15255 STX3-203ENST00000529177 1571 ntTSL 2 BASIC10.99□□□□□ -0.65
RTL8CO15255 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RTL8CO15255 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
RTL8CO15255 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
RTL8CO15255 FLJ16779-201ENST00000612722 7638 ntBASIC10.99□□□□□ -0.65
RTL8CO15255 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
RTL8CO15255 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
RTL8CO15255 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RTL8CO15255 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
RTL8CO15255 SPDYE19P-201ENST00000338590 713 ntBASIC10.99□□□□□ -0.65
RTL8CO15255 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
RTL8CO15255 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
RTL8CO15255 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC10.99□□□□□ -0.65
RTL8CO15255 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC10.99□□□□□ -0.65
RTL8CO15255 ZNF890P-202ENST00000530367 1156 ntBASIC10.99□□□□□ -0.65
RTL8CO15255 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC10.99□□□□□ -0.65
RTL8CO15255 KRT17P8-201ENST00000540749 863 ntBASIC10.99□□□□□ -0.65
RTL8CO15255 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC10.99□□□□□ -0.65
RTL8CO15255 AL079307.3-201ENST00000556114 283 ntBASIC10.99□□□□□ -0.65
RTL8CO15255 RAB43P1-201ENST00000561790 589 ntBASIC10.99□□□□□ -0.65
RTL8CO15255 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC10.99□□□□□ -0.65
RTL8CO15255 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC10.99□□□□□ -0.65
RTL8CO15255 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
RTL8CO15255 AL133215.2-201ENST00000609242 977 ntBASIC10.99□□□□□ -0.65
RTL8CO15255 AC004790.1-201ENST00000612686 536 ntBASIC10.99□□□□□ -0.65
RTL8CO15255 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
RTL8CO15255 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RTL8CO15255 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RTL8CO15255 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
RTL8CO15255 AC018470.1-201ENST00000624790 3129 ntBASIC10.99□□□□□ -0.65
RTL8CO15255 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RTL8CO15255 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC10.99□□□□□ -0.65
RTL8CO15255 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
RTL8CO15255 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
RTL8CO15255 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC10.99□□□□□ -0.65
RTL8CO15255 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
RTL8CO15255 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
RTL8CO15255 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC10.99□□□□□ -0.65
RTL8CO15255 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
RTL8CO15255 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RTL8CO15255 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
RTL8CO15255 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
RTL8CO15255 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
RTL8CO15255 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
RTL8CO15255 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC10.98□□□□□ -0.65
RTL8CO15255 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RTL8CO15255 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC10.98□□□□□ -0.65
RTL8CO15255 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RTL8CO15255 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RTL8CO15255 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
RTL8CO15255 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC10.98□□□□□ -0.65
RTL8CO15255 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RTL8CO15255 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
RTL8CO15255 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC10.98□□□□□ -0.65
RTL8CO15255 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RTL8CO15255 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RTL8CO15255 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
RTL8CO15255 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RTL8CO15255 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
RTL8CO15255 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
RTL8CO15255 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RTL8CO15255 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RTL8CO15255 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
RTL8CO15255 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC10.98□□□□□ -0.65
RTL8CO15255 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
RTL8CO15255 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RTL8CO15255 OSM-203ENST00000403463 464 ntTSL 3 BASIC10.98□□□□□ -0.65
RTL8CO15255 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
RTL8CO15255 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
RTL8CO15255 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
RTL8CO15255 AC093004.1-201ENST00000508850 424 ntBASIC10.98□□□□□ -0.65
RTL8CO15255 DOC2GP-202ENST00000514950 1163 ntBASIC10.98□□□□□ -0.65
RTL8CO15255 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC10.98□□□□□ -0.65
RTL8CO15255 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
RTL8CO15255 MAX-210ENST00000555419 765 ntTSL 5 BASIC10.98□□□□□ -0.65
RTL8CO15255 AC106886.1-201ENST00000568660 600 ntBASIC10.98□□□□□ -0.65
RTL8CO15255 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RTL8CO15255 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC10.98□□□□□ -0.65
RTL8CO15255 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC10.98□□□□□ -0.65
RTL8CO15255 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC10.98□□□□□ -0.65
RTL8CO15255 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
RTL8CO15255 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RTL8CO15255 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RTL8CO15255 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC10.98□□□□□ -0.65
RTL8CO15255 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms