Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 RELA-227ENST00000615805 2236 ntTSL 5 BASIC21.75■■□□□ 1.07
APAF1O14727 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
APAF1O14727 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
APAF1O14727 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
APAF1O14727 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
APAF1O14727 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
APAF1O14727 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
APAF1O14727 COA5-202ENST00000409997 557 ntTSL 4 BASIC21.75■■□□□ 1.07
APAF1O14727 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC21.75■■□□□ 1.07
APAF1O14727 ACTG1P14-201ENST00000446382 1122 ntBASIC21.75■■□□□ 1.07
APAF1O14727 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC21.75■■□□□ 1.07
APAF1O14727 AC023511.2-201ENST00000618803 211 ntBASIC21.75■■□□□ 1.07
APAF1O14727 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC21.75■■□□□ 1.07
APAF1O14727 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
APAF1O14727 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC21.75■■□□□ 1.07
APAF1O14727 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
APAF1O14727 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
APAF1O14727 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
APAF1O14727 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
APAF1O14727 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
APAF1O14727 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC21.75■■□□□ 1.07
APAF1O14727 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
APAF1O14727 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
APAF1O14727 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC21.74■■□□□ 1.07
APAF1O14727 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
APAF1O14727 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC21.74■■□□□ 1.07
APAF1O14727 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC21.74■■□□□ 1.07
APAF1O14727 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
APAF1O14727 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
APAF1O14727 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
APAF1O14727 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC21.74■■□□□ 1.07
APAF1O14727 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
APAF1O14727 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC21.74■■□□□ 1.07
APAF1O14727 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC21.74■■□□□ 1.07
APAF1O14727 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC21.74■■□□□ 1.07
APAF1O14727 AC093724.1-201ENST00000448659 1027 ntBASIC21.74■■□□□ 1.07
APAF1O14727 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC21.74■■□□□ 1.07
APAF1O14727 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC21.74■■□□□ 1.07
APAF1O14727 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
APAF1O14727 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC21.74■■□□□ 1.07
APAF1O14727 AC026120.1-201ENST00000611536 926 ntBASIC21.74■■□□□ 1.07
APAF1O14727 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
APAF1O14727 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
APAF1O14727 REXO1L8P-201ENST00000604378 1897 ntBASIC21.74■■□□□ 1.07
APAF1O14727 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
APAF1O14727 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
APAF1O14727 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
APAF1O14727 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
APAF1O14727 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
APAF1O14727 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
APAF1O14727 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
APAF1O14727 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC21.74■■□□□ 1.07
APAF1O14727 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC21.74■■□□□ 1.07
APAF1O14727 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC21.74■■□□□ 1.07
APAF1O14727 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
APAF1O14727 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC21.74■■□□□ 1.07
APAF1O14727 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
APAF1O14727 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
APAF1O14727 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
APAF1O14727 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
APAF1O14727 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
APAF1O14727 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
APAF1O14727 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
APAF1O14727 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
APAF1O14727 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
APAF1O14727 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
APAF1O14727 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
APAF1O14727 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
APAF1O14727 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
APAF1O14727 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
APAF1O14727 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
APAF1O14727 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
APAF1O14727 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
APAF1O14727 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
APAF1O14727 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC21.73■■□□□ 1.07
APAF1O14727 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC21.73■■□□□ 1.07
APAF1O14727 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
APAF1O14727 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
APAF1O14727 AC079140.1-201ENST00000508039 487 ntBASIC21.73■■□□□ 1.07
APAF1O14727 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC21.73■■□□□ 1.07
APAF1O14727 DHDH-204ENST00000523250 634 ntTSL 5 BASIC21.73■■□□□ 1.07
APAF1O14727 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC21.73■■□□□ 1.07
APAF1O14727 LINC01225-203ENST00000563550 1244 ntBASIC21.73■■□□□ 1.07
APAF1O14727 MIR3687-2-201ENST00000577708 61 ntBASIC21.73■■□□□ 1.07
APAF1O14727 MIR3687-1-201ENST00000614492 61 ntBASIC21.73■■□□□ 1.07
APAF1O14727 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC21.73■■□□□ 1.07
APAF1O14727 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
APAF1O14727 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC21.73■■□□□ 1.07
APAF1O14727 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
APAF1O14727 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC21.73■■□□□ 1.07
APAF1O14727 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
APAF1O14727 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC21.73■■□□□ 1.07
APAF1O14727 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
APAF1O14727 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
APAF1O14727 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
APAF1O14727 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC21.73■■□□□ 1.07
APAF1O14727 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
APAF1O14727 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
APAF1O14727 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC21.72■■□□□ 1.07
APAF1O14727 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms