Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
CUX2O14529 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CUX2O14529 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
CUX2O14529 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC27.81■■■□□ 2.04
CUX2O14529 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
CUX2O14529 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC27.81■■■□□ 2.04
CUX2O14529 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC27.81■■■□□ 2.04
CUX2O14529 INO80C-210ENST00000590757 595 ntTSL 2 BASIC27.81■■■□□ 2.04
CUX2O14529 LARP4-220ENST00000615080 856 ntTSL 5 BASIC27.81■■■□□ 2.04
CUX2O14529 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC27.81■■■□□ 2.04
CUX2O14529 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC27.81■■■□□ 2.04
CUX2O14529 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC27.81■■■□□ 2.04
CUX2O14529 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
CUX2O14529 AC006480.2-201ENST00000609770 1337 ntBASIC27.81■■■□□ 2.04
CUX2O14529 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC27.81■■■□□ 2.04
CUX2O14529 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
CUX2O14529 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
CUX2O14529 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
CUX2O14529 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
CUX2O14529 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
CUX2O14529 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CUX2O14529 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC27.8■■■□□ 2.04
CUX2O14529 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC27.8■■■□□ 2.04
CUX2O14529 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC27.8■■■□□ 2.04
CUX2O14529 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
CUX2O14529 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CUX2O14529 KRTAP10-13P-201ENST00000412914 571 ntBASIC27.8■■■□□ 2.04
CUX2O14529 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC27.8■■■□□ 2.04
CUX2O14529 PGAM1P5-201ENST00000548011 764 ntBASIC27.8■■■□□ 2.04
CUX2O14529 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC27.8■■■□□ 2.04
CUX2O14529 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC27.8■■■□□ 2.04
CUX2O14529 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC27.8■■■□□ 2.04
CUX2O14529 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
CUX2O14529 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC27.8■■■□□ 2.04
CUX2O14529 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC27.8■■■□□ 2.04
CUX2O14529 AC004408.2-201ENST00000623613 2777 ntBASIC27.8■■■□□ 2.04
CUX2O14529 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
CUX2O14529 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC27.8■■■□□ 2.04
CUX2O14529 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
CUX2O14529 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC27.8■■■□□ 2.04
CUX2O14529 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CUX2O14529 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CUX2O14529 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC27.79■■■□□ 2.04
CUX2O14529 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC27.79■■■□□ 2.04
CUX2O14529 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC27.79■■■□□ 2.04
CUX2O14529 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CUX2O14529 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC27.79■■■□□ 2.04
CUX2O14529 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC27.79■■■□□ 2.04
CUX2O14529 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC27.79■■■□□ 2.04
CUX2O14529 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CUX2O14529 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC27.79■■■□□ 2.04
CUX2O14529 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC27.79■■■□□ 2.04
CUX2O14529 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC27.79■■■□□ 2.04
CUX2O14529 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC27.79■■■□□ 2.04
CUX2O14529 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC27.79■■■□□ 2.04
CUX2O14529 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CUX2O14529 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC27.79■■■□□ 2.04
CUX2O14529 TBCB-211ENST00000589996 724 ntTSL 3 BASIC27.79■■■□□ 2.04
CUX2O14529 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC27.79■■■□□ 2.04
CUX2O14529 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC27.79■■■□□ 2.04
CUX2O14529 AC148477.9-201ENST00000623974 539 ntBASIC27.79■■■□□ 2.04
CUX2O14529 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CUX2O14529 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC27.79■■■□□ 2.04
CUX2O14529 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CUX2O14529 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CUX2O14529 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CUX2O14529 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC27.79■■■□□ 2.04
CUX2O14529 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC27.79■■■□□ 2.04
CUX2O14529 AL354751.1-201ENST00000412768 1863 ntBASIC27.79■■■□□ 2.04
CUX2O14529 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC27.78■■■□□ 2.04
CUX2O14529 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CUX2O14529 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
CUX2O14529 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
CUX2O14529 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC27.78■■■□□ 2.04
CUX2O14529 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
CUX2O14529 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC27.78■■■□□ 2.04
CUX2O14529 FGFR3P5-201ENST00000564496 886 ntBASIC27.78■■■□□ 2.04
CUX2O14529 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC27.78■■■□□ 2.04
CUX2O14529 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC27.78■■■□□ 2.04
CUX2O14529 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC27.78■■■□□ 2.04
CUX2O14529 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
CUX2O14529 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CUX2O14529 AC093525.9-201ENST00000624961 1746 ntBASIC27.78■■■□□ 2.04
CUX2O14529 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
CUX2O14529 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CUX2O14529 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CUX2O14529 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CUX2O14529 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC27.77■■■□□ 2.04
CUX2O14529 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC27.77■■■□□ 2.04
CUX2O14529 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CUX2O14529 AC018735.1-201ENST00000437208 1502 ntBASIC27.77■■■□□ 2.04
CUX2O14529 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CUX2O14529 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC27.77■■■□□ 2.04
CUX2O14529 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC27.77■■■□□ 2.04
CUX2O14529 AC134698.3-201ENST00000523880 214 ntBASIC27.77■■■□□ 2.04
CUX2O14529 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC27.77■■■□□ 2.04
CUX2O14529 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CUX2O14529 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CUX2O14529 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC27.77■■■□□ 2.04
CUX2O14529 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC27.77■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms