Protein–RNA interactions for Protein: O00329

PIK3CD, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform, humanhuman

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3CDO00329 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.64■□□□□ 0.57
PIK3CDO00329 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PIK3CDO00329 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PIK3CDO00329 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PIK3CDO00329 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PIK3CDO00329 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PIK3CDO00329 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PIK3CDO00329 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PIK3CDO00329 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
PIK3CDO00329 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PIK3CDO00329 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PIK3CDO00329 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PIK3CDO00329 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PIK3CDO00329 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PIK3CDO00329 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.64■□□□□ 0.57
PIK3CDO00329 MIR943-201ENST00000401286 94 ntBASIC18.64■□□□□ 0.57
PIK3CDO00329 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PIK3CDO00329 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.64■□□□□ 0.57
PIK3CDO00329 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.64■□□□□ 0.57
PIK3CDO00329 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.64■□□□□ 0.57
PIK3CDO00329 AC069120.2-201ENST00000524091 540 ntBASIC18.64■□□□□ 0.57
PIK3CDO00329 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.64■□□□□ 0.57
PIK3CDO00329 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.64■□□□□ 0.57
PIK3CDO00329 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.64■□□□□ 0.57
PIK3CDO00329 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.64■□□□□ 0.57
PIK3CDO00329 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PIK3CDO00329 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PIK3CDO00329 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PIK3CDO00329 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PIK3CDO00329 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PIK3CDO00329 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
PIK3CDO00329 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.64■□□□□ 0.57
PIK3CDO00329 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PIK3CDO00329 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
PIK3CDO00329 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PIK3CDO00329 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PIK3CDO00329 PRORSD1P-202ENST00000563365 2154 ntBASIC18.64■□□□□ 0.57
PIK3CDO00329 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.64■□□□□ 0.57
PIK3CDO00329 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.63■□□□□ 0.57
PIK3CDO00329 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PIK3CDO00329 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.63■□□□□ 0.57
PIK3CDO00329 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PIK3CDO00329 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PIK3CDO00329 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PIK3CDO00329 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PIK3CDO00329 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PIK3CDO00329 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PIK3CDO00329 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PIK3CDO00329 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.63■□□□□ 0.57
PIK3CDO00329 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.63■□□□□ 0.57
PIK3CDO00329 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.63■□□□□ 0.57
PIK3CDO00329 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.63■□□□□ 0.57
PIK3CDO00329 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.63■□□□□ 0.57
PIK3CDO00329 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.63■□□□□ 0.57
PIK3CDO00329 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PIK3CDO00329 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.63■□□□□ 0.57
PIK3CDO00329 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.63■□□□□ 0.57
PIK3CDO00329 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.63■□□□□ 0.57
PIK3CDO00329 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.63■□□□□ 0.57
PIK3CDO00329 AL365330.1-201ENST00000607459 531 ntBASIC18.63■□□□□ 0.57
PIK3CDO00329 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.63■□□□□ 0.57
PIK3CDO00329 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PIK3CDO00329 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PIK3CDO00329 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PIK3CDO00329 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PIK3CDO00329 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.63■□□□□ 0.57
PIK3CDO00329 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PIK3CDO00329 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PIK3CDO00329 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PIK3CDO00329 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PIK3CDO00329 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
PIK3CDO00329 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.63■□□□□ 0.57
PIK3CDO00329 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PIK3CDO00329 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PIK3CDO00329 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PIK3CDO00329 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PIK3CDO00329 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PIK3CDO00329 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PIK3CDO00329 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PIK3CDO00329 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.62■□□□□ 0.57
PIK3CDO00329 AC092580.3-201ENST00000430932 139 ntBASIC18.62■□□□□ 0.57
PIK3CDO00329 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.62■□□□□ 0.57
PIK3CDO00329 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.62■□□□□ 0.57
PIK3CDO00329 AC105021.1-202ENST00000570572 669 ntBASIC18.62■□□□□ 0.57
PIK3CDO00329 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.62■□□□□ 0.57
PIK3CDO00329 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.62■□□□□ 0.57
PIK3CDO00329 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.62■□□□□ 0.57
PIK3CDO00329 FO538757.1-201ENST00000623083 1397 ntBASIC18.62■□□□□ 0.57
PIK3CDO00329 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.62■□□□□ 0.57
PIK3CDO00329 AL592424.1-201ENST00000563624 1536 ntBASIC18.62■□□□□ 0.57
PIK3CDO00329 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.62■□□□□ 0.57
PIK3CDO00329 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PIK3CDO00329 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.62■□□□□ 0.57
PIK3CDO00329 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PIK3CDO00329 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PIK3CDO00329 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PIK3CDO00329 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
PIK3CDO00329 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PIK3CDO00329 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.61■□□□□ 0.57
PIK3CDO00329 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms