Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.76■□□□□ 0.27
AP3B1O00203 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP3B1O00203 AC092364.2-201ENST00000596710 2692 ntBASIC16.76■□□□□ 0.27
AP3B1O00203 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
AP3B1O00203 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.76■□□□□ 0.27
AP3B1O00203 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
AP3B1O00203 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP3B1O00203 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP3B1O00203 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP3B1O00203 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.76■□□□□ 0.27
AP3B1O00203 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP3B1O00203 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP3B1O00203 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP3B1O00203 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP3B1O00203 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.76■□□□□ 0.27
AP3B1O00203 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP3B1O00203 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP3B1O00203 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.76■□□□□ 0.27
AP3B1O00203 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.76■□□□□ 0.27
AP3B1O00203 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.76■□□□□ 0.27
AP3B1O00203 AL031284.1-201ENST00000419297 478 ntBASIC16.76■□□□□ 0.27
AP3B1O00203 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.76■□□□□ 0.27
AP3B1O00203 AC092910.1-201ENST00000482027 1129 ntBASIC16.76■□□□□ 0.27
AP3B1O00203 AC108751.1-201ENST00000490852 363 ntBASIC16.76■□□□□ 0.27
AP3B1O00203 AL662844.1-201ENST00000546340 181 ntBASIC16.76■□□□□ 0.27
AP3B1O00203 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.76■□□□□ 0.27
AP3B1O00203 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.76■□□□□ 0.27
AP3B1O00203 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.76■□□□□ 0.27
AP3B1O00203 MIR4751-201ENST00000578027 74 ntBASIC16.76■□□□□ 0.27
AP3B1O00203 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.76■□□□□ 0.27
AP3B1O00203 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
AP3B1O00203 ACTL9-202ENST00000612068 1252 ntBASIC16.76■□□□□ 0.27
AP3B1O00203 AL596087.1-201ENST00000400979 1969 ntBASIC16.76■□□□□ 0.27
AP3B1O00203 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.76■□□□□ 0.27
AP3B1O00203 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
AP3B1O00203 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
AP3B1O00203 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.76■□□□□ 0.27
AP3B1O00203 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP3B1O00203 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.76■□□□□ 0.27
AP3B1O00203 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.76■□□□□ 0.27
AP3B1O00203 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.76■□□□□ 0.27
AP3B1O00203 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
AP3B1O00203 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP3B1O00203 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.76■□□□□ 0.27
AP3B1O00203 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP3B1O00203 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
AP3B1O00203 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP3B1O00203 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
AP3B1O00203 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
AP3B1O00203 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3B1O00203 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3B1O00203 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3B1O00203 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
AP3B1O00203 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
AP3B1O00203 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.75■□□□□ 0.27
AP3B1O00203 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3B1O00203 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3B1O00203 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
AP3B1O00203 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.75■□□□□ 0.27
AP3B1O00203 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3B1O00203 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3B1O00203 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3B1O00203 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3B1O00203 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3B1O00203 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3B1O00203 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3B1O00203 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.75■□□□□ 0.27
AP3B1O00203 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3B1O00203 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3B1O00203 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3B1O00203 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3B1O00203 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.75■□□□□ 0.27
AP3B1O00203 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.75■□□□□ 0.27
AP3B1O00203 AP002469.2-201ENST00000531724 424 ntBASIC16.75■□□□□ 0.27
AP3B1O00203 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.75■□□□□ 0.27
AP3B1O00203 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.75■□□□□ 0.27
AP3B1O00203 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.75■□□□□ 0.27
AP3B1O00203 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
AP3B1O00203 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.75■□□□□ 0.27
AP3B1O00203 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
AP3B1O00203 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3B1O00203 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
AP3B1O00203 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3B1O00203 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
AP3B1O00203 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3B1O00203 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.74■□□□□ 0.27
AP3B1O00203 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.74■□□□□ 0.27
AP3B1O00203 MST1L-201ENST00000442552 2185 ntBASIC16.74■□□□□ 0.27
AP3B1O00203 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP3B1O00203 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP3B1O00203 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP3B1O00203 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3B1O00203 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3B1O00203 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.74■□□□□ 0.27
AP3B1O00203 RNU1-129P-201ENST00000384064 167 ntBASIC16.74■□□□□ 0.27
AP3B1O00203 CRYGEP-201ENST00000412192 528 ntBASIC16.74■□□□□ 0.27
AP3B1O00203 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP3B1O00203 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3B1O00203 VN2R19P-201ENST00000442399 1052 ntBASIC16.74■□□□□ 0.27
AP3B1O00203 AC079781.3-201ENST00000449110 356 ntBASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms