Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.85■□□□□ 0.13
PDLIM1O00151 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.85■□□□□ 0.13
PDLIM1O00151 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM1O00151 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.85■□□□□ 0.13
PDLIM1O00151 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.85■□□□□ 0.13
PDLIM1O00151 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.85■□□□□ 0.13
PDLIM1O00151 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM1O00151 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM1O00151 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM1O00151 AC073347.1-201ENST00000421633 2643 ntBASIC15.85■□□□□ 0.13
PDLIM1O00151 AL596087.1-201ENST00000400979 1969 ntBASIC15.85■□□□□ 0.13
PDLIM1O00151 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.85■□□□□ 0.13
PDLIM1O00151 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM1O00151 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.85■□□□□ 0.13
PDLIM1O00151 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM1O00151 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM1O00151 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PDLIM1O00151 AL603832.2-201ENST00000566195 2125 ntBASIC15.85■□□□□ 0.13
PDLIM1O00151 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PDLIM1O00151 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.85■□□□□ 0.13
PDLIM1O00151 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
PDLIM1O00151 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM1O00151 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM1O00151 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PDLIM1O00151 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
PDLIM1O00151 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.84■□□□□ 0.13
PDLIM1O00151 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM1O00151 GPR89P-201ENST00000407924 1495 ntBASIC15.84■□□□□ 0.13
PDLIM1O00151 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM1O00151 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
PDLIM1O00151 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.84■□□□□ 0.13
PDLIM1O00151 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM1O00151 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.84■□□□□ 0.13
PDLIM1O00151 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM1O00151 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.84■□□□□ 0.13
PDLIM1O00151 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PDLIM1O00151 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM1O00151 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM1O00151 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
PDLIM1O00151 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.84■□□□□ 0.13
PDLIM1O00151 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM1O00151 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM1O00151 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.84■□□□□ 0.13
PDLIM1O00151 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.84■□□□□ 0.13
PDLIM1O00151 TOB2P1-201ENST00000469761 992 ntBASIC15.84■□□□□ 0.13
PDLIM1O00151 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.84■□□□□ 0.13
PDLIM1O00151 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.84■□□□□ 0.13
PDLIM1O00151 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.84■□□□□ 0.13
PDLIM1O00151 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.84■□□□□ 0.13
PDLIM1O00151 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.84■□□□□ 0.13
PDLIM1O00151 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM1O00151 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM1O00151 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.84■□□□□ 0.13
PDLIM1O00151 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM1O00151 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.84■□□□□ 0.13
PDLIM1O00151 AC097374.2-201ENST00000618617 1306 ntBASIC15.84■□□□□ 0.13
PDLIM1O00151 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM1O00151 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.84■□□□□ 0.13
PDLIM1O00151 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM1O00151 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
PDLIM1O00151 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM1O00151 AC233702.3-201ENST00000578656 1387 ntBASIC15.84■□□□□ 0.13
PDLIM1O00151 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PDLIM1O00151 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
PDLIM1O00151 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM1O00151 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM1O00151 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM1O00151 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM1O00151 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM1O00151 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.84■□□□□ 0.13
PDLIM1O00151 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDLIM1O00151 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PDLIM1O00151 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
PDLIM1O00151 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
PDLIM1O00151 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PDLIM1O00151 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
PDLIM1O00151 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
PDLIM1O00151 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.83■□□□□ 0.13
PDLIM1O00151 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.83■□□□□ 0.13
PDLIM1O00151 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PDLIM1O00151 AL135999.2-201ENST00000622438 1686 ntBASIC15.83■□□□□ 0.13
PDLIM1O00151 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PDLIM1O00151 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
PDLIM1O00151 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
PDLIM1O00151 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.83■□□□□ 0.12
PDLIM1O00151 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDLIM1O00151 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDLIM1O00151 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDLIM1O00151 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PDLIM1O00151 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.83■□□□□ 0.12
PDLIM1O00151 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
PDLIM1O00151 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PDLIM1O00151 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDLIM1O00151 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDLIM1O00151 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDLIM1O00151 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.83■□□□□ 0.12
PDLIM1O00151 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDLIM1O00151 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.83■□□□□ 0.12
PDLIM1O00151 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.83■□□□□ 0.12
PDLIM1O00151 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms