Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.1■□□□□ 0.01
NPIPA3F8WFD2 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.1■□□□□ 0.01
NPIPA3F8WFD2 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.1■□□□□ 0.01
NPIPA3F8WFD2 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.1■□□□□ 0.01
NPIPA3F8WFD2 AL031055.1-201ENST00000606362 631 ntBASIC15.1■□□□□ 0.01
NPIPA3F8WFD2 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA3F8WFD2 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA3F8WFD2 UXT-AS1-201ENST00000590504 1525 ntBASIC15.1■□□□□ 0.01
NPIPA3F8WFD2 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA3F8WFD2 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA3F8WFD2 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA3F8WFD2 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA3F8WFD2 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA3F8WFD2 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA3F8WFD2 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA3F8WFD2 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA3F8WFD2 PCDHB17P-201ENST00000539533 2393 ntBASIC15.1■□□□□ 0.01
NPIPA3F8WFD2 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.1■□□□□ 0.01
NPIPA3F8WFD2 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA3F8WFD2 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 AC092474.2-201ENST00000424288 719 ntBASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 SPCS2P4-201ENST00000436160 681 ntBASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 AC069335.1-201ENST00000489972 472 ntBASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 AC109635.5-201ENST00000533593 962 ntBASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 AC092364.2-202ENST00000597012 1073 ntBASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA3F8WFD2 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
NPIPA3F8WFD2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPA3F8WFD2 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.08■□□□□ 0
NPIPA3F8WFD2 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.08■□□□□ 0
NPIPA3F8WFD2 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPA3F8WFD2 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.08■□□□□ 0
NPIPA3F8WFD2 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPA3F8WFD2 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0
NPIPA3F8WFD2 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPA3F8WFD2 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.08■□□□□ 0
NPIPA3F8WFD2 RNU1-129P-201ENST00000384064 167 ntBASIC15.08■□□□□ 0
NPIPA3F8WFD2 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPA3F8WFD2 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.08■□□□□ 0
NPIPA3F8WFD2 FAM58DP-201ENST00000428076 619 ntBASIC15.08■□□□□ 0
NPIPA3F8WFD2 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.08■□□□□ 0
NPIPA3F8WFD2 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPA3F8WFD2 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.08■□□□□ 0
NPIPA3F8WFD2 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.08■□□□□ 0
NPIPA3F8WFD2 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
NPIPA3F8WFD2 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.08■□□□□ 0
NPIPA3F8WFD2 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.08■□□□□ 0
NPIPA3F8WFD2 U1.21-201ENST00000580816 167 ntBASIC15.08■□□□□ 0
NPIPA3F8WFD2 MPDU1-223ENST00000582151 728 ntBASIC15.08■□□□□ 0
NPIPA3F8WFD2 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPA3F8WFD2 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
NPIPA3F8WFD2 Z92544.3-201ENST00000624747 417 ntBASIC15.08■□□□□ 0
NPIPA3F8WFD2 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPA3F8WFD2 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPA3F8WFD2 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.08■□□□□ 0
NPIPA3F8WFD2 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
NPIPA3F8WFD2 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
NPIPA3F8WFD2 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.08■□□□□ 0
NPIPA3F8WFD2 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPA3F8WFD2 WASH6P-202ENST00000359512 1437 ntBASIC15.08■□□□□ 0
NPIPA3F8WFD2 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms