Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 AC009407.1-201ENST00000568958 598 ntBASIC14.45□□□□□ -0.1
MBD3L3A6NE82 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 AL365330.1-201ENST00000607459 531 ntBASIC14.45□□□□□ -0.1
MBD3L3A6NE82 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 U82695.1-201ENST00000635752 1889 ntBASIC14.45□□□□□ -0.1
MBD3L3A6NE82 AF228730.6-201ENST00000641497 218 ntBASIC14.45□□□□□ -0.1
MBD3L3A6NE82 AC084121.3-201ENST00000641716 218 ntBASIC14.45□□□□□ -0.1
MBD3L3A6NE82 AC105233.6-201ENST00000642093 218 ntBASIC14.45□□□□□ -0.1
MBD3L3A6NE82 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 PIN1P1-201ENST00000412108 996 ntBASIC14.44□□□□□ -0.1
MBD3L3A6NE82 SPDYE17-201ENST00000412399 783 ntBASIC14.44□□□□□ -0.1
MBD3L3A6NE82 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 HLA-A-202ENST00000376806 1854 ntBASIC14.44□□□□□ -0.1
MBD3L3A6NE82 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.44□□□□□ -0.1
MBD3L3A6NE82 AC005622.1-201ENST00000636801 1703 ntBASIC14.44□□□□□ -0.1
MBD3L3A6NE82 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
MBD3L3A6NE82 AC078925.2-201ENST00000624013 1973 ntBASIC14.43□□□□□ -0.1
MBD3L3A6NE82 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MBD3L3A6NE82 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
MBD3L3A6NE82 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MBD3L3A6NE82 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.43□□□□□ -0.1
MBD3L3A6NE82 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
MBD3L3A6NE82 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.43□□□□□ -0.1
MBD3L3A6NE82 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MBD3L3A6NE82 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
MBD3L3A6NE82 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
MBD3L3A6NE82 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MBD3L3A6NE82 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.43□□□□□ -0.1
MBD3L3A6NE82 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MBD3L3A6NE82 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.43□□□□□ -0.1
MBD3L3A6NE82 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
MBD3L3A6NE82 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms