Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ARFGEF1Q9Y6D6 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.9■□□□□ 0.78
ARFGEF1Q9Y6D6 AL139010.1-201ENST00000454878 894 ntBASIC19.9■□□□□ 0.78
ARFGEF1Q9Y6D6 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ARFGEF1Q9Y6D6 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC19.9■□□□□ 0.78
ARFGEF1Q9Y6D6 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC19.9■□□□□ 0.78
ARFGEF1Q9Y6D6 FAM86HP-204ENST00000513466 959 ntBASIC19.9■□□□□ 0.78
ARFGEF1Q9Y6D6 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC19.9■□□□□ 0.78
ARFGEF1Q9Y6D6 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC19.9■□□□□ 0.78
ARFGEF1Q9Y6D6 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ARFGEF1Q9Y6D6 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC19.9■□□□□ 0.78
ARFGEF1Q9Y6D6 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC19.9■□□□□ 0.78
ARFGEF1Q9Y6D6 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
ARFGEF1Q9Y6D6 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ARFGEF1Q9Y6D6 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ARFGEF1Q9Y6D6 KRT8P39-201ENST00000396270 1433 ntBASIC19.9■□□□□ 0.78
ARFGEF1Q9Y6D6 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
ARFGEF1Q9Y6D6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.9■□□□□ 0.78
ARFGEF1Q9Y6D6 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC19.9■□□□□ 0.78
ARFGEF1Q9Y6D6 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ARFGEF1Q9Y6D6 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ARFGEF1Q9Y6D6 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
ARFGEF1Q9Y6D6 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.9■□□□□ 0.78
ARFGEF1Q9Y6D6 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC19.9■□□□□ 0.78
ARFGEF1Q9Y6D6 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ARFGEF1Q9Y6D6 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ARFGEF1Q9Y6D6 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
ARFGEF1Q9Y6D6 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ARFGEF1Q9Y6D6 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ARFGEF1Q9Y6D6 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ARFGEF1Q9Y6D6 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC19.9■□□□□ 0.78
ARFGEF1Q9Y6D6 HIST3H2BA-201ENST00000436555 524 ntBASIC19.9■□□□□ 0.78
ARFGEF1Q9Y6D6 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC19.9■□□□□ 0.78
ARFGEF1Q9Y6D6 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC19.9■□□□□ 0.78
ARFGEF1Q9Y6D6 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC19.9■□□□□ 0.78
ARFGEF1Q9Y6D6 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC19.9■□□□□ 0.78
ARFGEF1Q9Y6D6 AL049840.4-201ENST00000602422 811 ntBASIC19.9■□□□□ 0.78
ARFGEF1Q9Y6D6 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.9■□□□□ 0.78
ARFGEF1Q9Y6D6 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
ARFGEF1Q9Y6D6 INTS4P2-202ENST00000614726 2019 ntBASIC19.89■□□□□ 0.77
ARFGEF1Q9Y6D6 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
ARFGEF1Q9Y6D6 ZBTB12BP-201ENST00000314232 1122 ntBASIC19.89■□□□□ 0.77
ARFGEF1Q9Y6D6 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
ARFGEF1Q9Y6D6 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
ARFGEF1Q9Y6D6 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
ARFGEF1Q9Y6D6 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC19.89■□□□□ 0.77
ARFGEF1Q9Y6D6 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC19.89■□□□□ 0.77
ARFGEF1Q9Y6D6 AL118558.3-201ENST00000607414 1079 ntBASIC19.89■□□□□ 0.77
ARFGEF1Q9Y6D6 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ARFGEF1Q9Y6D6 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.89■□□□□ 0.77
ARFGEF1Q9Y6D6 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
ARFGEF1Q9Y6D6 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ARFGEF1Q9Y6D6 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.89■□□□□ 0.77
ARFGEF1Q9Y6D6 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.89■□□□□ 0.77
ARFGEF1Q9Y6D6 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.89■□□□□ 0.77
ARFGEF1Q9Y6D6 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ARFGEF1Q9Y6D6 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC19.89■□□□□ 0.77
ARFGEF1Q9Y6D6 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ARFGEF1Q9Y6D6 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
ARFGEF1Q9Y6D6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ARFGEF1Q9Y6D6 HARS-202ENST00000415192 1401 ntTSL 2 BASIC19.88■□□□□ 0.77
ARFGEF1Q9Y6D6 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
ARFGEF1Q9Y6D6 AC007969.1-201ENST00000433675 447 ntBASIC19.88■□□□□ 0.77
ARFGEF1Q9Y6D6 BCRP2-202ENST00000447763 634 ntBASIC19.88■□□□□ 0.77
ARFGEF1Q9Y6D6 BCRP6-201ENST00000510112 632 ntBASIC19.88■□□□□ 0.77
ARFGEF1Q9Y6D6 BCRP7-201ENST00000511549 544 ntBASIC19.88■□□□□ 0.77
ARFGEF1Q9Y6D6 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC19.88■□□□□ 0.77
ARFGEF1Q9Y6D6 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ARFGEF1Q9Y6D6 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ARFGEF1Q9Y6D6 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC19.88■□□□□ 0.77
ARFGEF1Q9Y6D6 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.88■□□□□ 0.77
ARFGEF1Q9Y6D6 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ARFGEF1Q9Y6D6 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ARFGEF1Q9Y6D6 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
ARFGEF1Q9Y6D6 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
ARFGEF1Q9Y6D6 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
ARFGEF1Q9Y6D6 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ARFGEF1Q9Y6D6 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
ARFGEF1Q9Y6D6 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ARFGEF1Q9Y6D6 AC105129.2-201ENST00000559536 390 ntBASIC19.88■□□□□ 0.77
ARFGEF1Q9Y6D6 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC19.88■□□□□ 0.77
ARFGEF1Q9Y6D6 AC015967.2-201ENST00000624092 234 ntBASIC19.88■□□□□ 0.77
ARFGEF1Q9Y6D6 AC006435.4-201ENST00000625037 234 ntBASIC19.88■□□□□ 0.77
ARFGEF1Q9Y6D6 AL356737.1-201ENST00000634391 234 ntBASIC19.88■□□□□ 0.77
ARFGEF1Q9Y6D6 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
ARFGEF1Q9Y6D6 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC19.87■□□□□ 0.77
ARFGEF1Q9Y6D6 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ARFGEF1Q9Y6D6 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ARFGEF1Q9Y6D6 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
ARFGEF1Q9Y6D6 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ARFGEF1Q9Y6D6 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
ARFGEF1Q9Y6D6 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC19.87■□□□□ 0.77
ARFGEF1Q9Y6D6 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC19.87■□□□□ 0.77
ARFGEF1Q9Y6D6 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC19.87■□□□□ 0.77
ARFGEF1Q9Y6D6 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC19.87■□□□□ 0.77
ARFGEF1Q9Y6D6 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC19.87■□□□□ 0.77
ARFGEF1Q9Y6D6 AC106760.1-201ENST00000508690 800 ntBASIC19.87■□□□□ 0.77
ARFGEF1Q9Y6D6 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
ARFGEF1Q9Y6D6 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC19.87■□□□□ 0.77
ARFGEF1Q9Y6D6 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms