Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL4A3BPQ9Y5P4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL4A3BPQ9Y5P4 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
COL4A3BPQ9Y5P4 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.53■□□□□ 0.56
COL4A3BPQ9Y5P4 AC004461.1-201ENST00000412461 403 ntBASIC18.53■□□□□ 0.56
COL4A3BPQ9Y5P4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL4A3BPQ9Y5P4 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL4A3BPQ9Y5P4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.53■□□□□ 0.56
COL4A3BPQ9Y5P4 FAM86C2P-203ENST00000528684 1004 ntBASIC18.53■□□□□ 0.56
COL4A3BPQ9Y5P4 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.53■□□□□ 0.56
COL4A3BPQ9Y5P4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.53■□□□□ 0.56
COL4A3BPQ9Y5P4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
COL4A3BPQ9Y5P4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
COL4A3BPQ9Y5P4 AC022145.2-201ENST00000598203 171 ntBASIC18.53■□□□□ 0.56
COL4A3BPQ9Y5P4 AC027612.4-201ENST00000605371 583 ntBASIC18.53■□□□□ 0.56
COL4A3BPQ9Y5P4 AL161645.1-201ENST00000622716 1255 ntBASIC18.53■□□□□ 0.56
COL4A3BPQ9Y5P4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.53■□□□□ 0.56
COL4A3BPQ9Y5P4 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
COL4A3BPQ9Y5P4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
COL4A3BPQ9Y5P4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL4A3BPQ9Y5P4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
COL4A3BPQ9Y5P4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.53■□□□□ 0.56
COL4A3BPQ9Y5P4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL4A3BPQ9Y5P4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL4A3BPQ9Y5P4 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL4A3BPQ9Y5P4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.52■□□□□ 0.56
COL4A3BPQ9Y5P4 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
COL4A3BPQ9Y5P4 AL512652.2-201ENST00000625156 1716 ntBASIC18.52■□□□□ 0.56
COL4A3BPQ9Y5P4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL4A3BPQ9Y5P4 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.52■□□□□ 0.56
COL4A3BPQ9Y5P4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.52■□□□□ 0.56
COL4A3BPQ9Y5P4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL4A3BPQ9Y5P4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL4A3BPQ9Y5P4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.52■□□□□ 0.56
COL4A3BPQ9Y5P4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.52■□□□□ 0.56
COL4A3BPQ9Y5P4 PMS2P2-201ENST00000425039 1128 ntBASIC18.52■□□□□ 0.56
COL4A3BPQ9Y5P4 TIMM8BP1-201ENST00000452384 211 ntBASIC18.52■□□□□ 0.56
COL4A3BPQ9Y5P4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL4A3BPQ9Y5P4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.52■□□□□ 0.56
COL4A3BPQ9Y5P4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
COL4A3BPQ9Y5P4 RARRES2P8-201ENST00000566335 367 ntBASIC18.52■□□□□ 0.56
COL4A3BPQ9Y5P4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.52■□□□□ 0.56
COL4A3BPQ9Y5P4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.52■□□□□ 0.56
COL4A3BPQ9Y5P4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.52■□□□□ 0.56
COL4A3BPQ9Y5P4 AC004835.2-201ENST00000603762 682 ntBASIC18.52■□□□□ 0.56
COL4A3BPQ9Y5P4 AC026120.1-201ENST00000611536 926 ntBASIC18.52■□□□□ 0.56
COL4A3BPQ9Y5P4 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL4A3BPQ9Y5P4 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL4A3BPQ9Y5P4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL4A3BPQ9Y5P4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.52■□□□□ 0.55
COL4A3BPQ9Y5P4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL4A3BPQ9Y5P4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
COL4A3BPQ9Y5P4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL4A3BPQ9Y5P4 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.52■□□□□ 0.55
COL4A3BPQ9Y5P4 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.52■□□□□ 0.55
COL4A3BPQ9Y5P4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.52■□□□□ 0.55
COL4A3BPQ9Y5P4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL4A3BPQ9Y5P4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 KRT18P28-201ENST00000453838 1332 ntBASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 MIR3909-201ENST00000579518 119 ntBASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL4A3BPQ9Y5P4 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
COL4A3BPQ9Y5P4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms