Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHB11Q9Y5F2 LINC00628-201ENST00000628516 1289 ntBASIC16.26■□□□□ 0.19
PCDHB11Q9Y5F2 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
PCDHB11Q9Y5F2 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHB11Q9Y5F2 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB11Q9Y5F2 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB11Q9Y5F2 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.26■□□□□ 0.19
PCDHB11Q9Y5F2 AC006277.1-201ENST00000624348 1610 ntBASIC16.26■□□□□ 0.19
PCDHB11Q9Y5F2 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB11Q9Y5F2 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB11Q9Y5F2 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHB11Q9Y5F2 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB11Q9Y5F2 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PCDHB11Q9Y5F2 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 AC012569.1-201ENST00000591191 1524 ntBASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 AL391256.1-201ENST00000443260 1855 ntBASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 SLC22A20-204ENST00000530038 1673 ntBASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 COX20P2-201ENST00000452636 358 ntBASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 FAM86C2P-203ENST00000528684 1004 ntBASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 MIR4492-201ENST00000581627 80 ntBASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 NFIC-211ENST00000641145 8399 ntBASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHB11Q9Y5F2 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 AL035633.1-201ENST00000406139 838 ntBASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 BCRP1-201ENST00000444246 691 ntBASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 AC067863.1-201ENST00000494933 530 ntBASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 RNA5SP421-201ENST00000516864 134 ntBASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 AC022145.2-201ENST00000598203 171 ntBASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 AC239800.4-201ENST00000603712 296 ntBASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms