Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 AC074386.1-202ENST00000463561 864 ntBASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 PDPK2P-202ENST00000562415 1191 ntBASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 TMF1P1-201ENST00000576058 373 ntBASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 AL031055.1-201ENST00000606362 631 ntBASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 AC021097.1-201ENST00000607902 574 ntBASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 AL031731.1-201ENST00000642131 2094 ntBASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB13Q9Y5F0 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB13Q9Y5F0 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHB13Q9Y5F0 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
PCDHB13Q9Y5F0 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
PCDHB13Q9Y5F0 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB13Q9Y5F0 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB13Q9Y5F0 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB13Q9Y5F0 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB13Q9Y5F0 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB13Q9Y5F0 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB13Q9Y5F0 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB13Q9Y5F0 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB13Q9Y5F0 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB13Q9Y5F0 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB13Q9Y5F0 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB13Q9Y5F0 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB13Q9Y5F0 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB13Q9Y5F0 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB13Q9Y5F0 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB13Q9Y5F0 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PCDHB13Q9Y5F0 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHB13Q9Y5F0 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PCDHB13Q9Y5F0 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB13Q9Y5F0 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDHB13Q9Y5F0 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB13Q9Y5F0 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDHB13Q9Y5F0 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
PCDHB13Q9Y5F0 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB13Q9Y5F0 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PCDHB13Q9Y5F0 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB13Q9Y5F0 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB13Q9Y5F0 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB13Q9Y5F0 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB13Q9Y5F0 AL662844.4-201ENST00000606367 2838 ntBASIC18.36■□□□□ 0.53
PCDHB13Q9Y5F0 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB13Q9Y5F0 PCDHB19P-201ENST00000570871 2371 ntBASIC18.35■□□□□ 0.53
PCDHB13Q9Y5F0 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHB13Q9Y5F0 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PCDHB13Q9Y5F0 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB13Q9Y5F0 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PCDHB13Q9Y5F0 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB13Q9Y5F0 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
PCDHB13Q9Y5F0 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB13Q9Y5F0 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB13Q9Y5F0 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB13Q9Y5F0 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHB13Q9Y5F0 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB13Q9Y5F0 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PCDHB13Q9Y5F0 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB13Q9Y5F0 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB13Q9Y5F0 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PCDHB13Q9Y5F0 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PCDHB13Q9Y5F0 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHB13Q9Y5F0 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB13Q9Y5F0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB13Q9Y5F0 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
PCDHB13Q9Y5F0 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB13Q9Y5F0 CCDC152-202ENST00000388827 1237 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHB13Q9Y5F0 AC140658.5-201ENST00000438532 169 ntBASIC18.35■□□□□ 0.53
PCDHB13Q9Y5F0 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms