Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB7Q9Y5E2 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB7Q9Y5E2 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB7Q9Y5E2 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PCDHB7Q9Y5E2 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB7Q9Y5E2 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PCDHB7Q9Y5E2 OR8S1-201ENST00000310194 1080 ntBASIC17.74■□□□□ 0.43
PCDHB7Q9Y5E2 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHB7Q9Y5E2 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB7Q9Y5E2 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.74■□□□□ 0.43
PCDHB7Q9Y5E2 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHB7Q9Y5E2 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHB7Q9Y5E2 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHB7Q9Y5E2 RN7SL618P-201ENST00000477850 296 ntBASIC17.74■□□□□ 0.43
PCDHB7Q9Y5E2 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHB7Q9Y5E2 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHB7Q9Y5E2 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHB7Q9Y5E2 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.74■□□□□ 0.43
PCDHB7Q9Y5E2 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.74■□□□□ 0.43
PCDHB7Q9Y5E2 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB7Q9Y5E2 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PCDHB7Q9Y5E2 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB7Q9Y5E2 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB7Q9Y5E2 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB7Q9Y5E2 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PCDHB7Q9Y5E2 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHB7Q9Y5E2 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 AL512652.2-201ENST00000625156 1716 ntBASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 API5-211ENST00000534695 560 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 AL008721.1-201ENST00000609964 604 ntBASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB7Q9Y5E2 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PCDHB7Q9Y5E2 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHB7Q9Y5E2 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB7Q9Y5E2 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHB7Q9Y5E2 AL589702.1-201ENST00000641229 1509 ntBASIC17.72■□□□□ 0.43
PCDHB7Q9Y5E2 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB7Q9Y5E2 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
PCDHB7Q9Y5E2 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
PCDHB7Q9Y5E2 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB7Q9Y5E2 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB7Q9Y5E2 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PCDHB7Q9Y5E2 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.72■□□□□ 0.43
PCDHB7Q9Y5E2 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHB7Q9Y5E2 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PCDHB7Q9Y5E2 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
PCDHB7Q9Y5E2 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB7Q9Y5E2 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB7Q9Y5E2 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB7Q9Y5E2 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.72■□□□□ 0.43
PCDHB7Q9Y5E2 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB7Q9Y5E2 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB7Q9Y5E2 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB7Q9Y5E2 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PCDHB7Q9Y5E2 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB7Q9Y5E2 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHB7Q9Y5E2 GNAQP1-201ENST00000444815 1067 ntBASIC17.72■□□□□ 0.43
PCDHB7Q9Y5E2 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PCDHB7Q9Y5E2 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHB7Q9Y5E2 ZNF890P-202ENST00000530367 1156 ntBASIC17.72■□□□□ 0.43
PCDHB7Q9Y5E2 AC140912.1-201ENST00000577171 1054 ntBASIC17.72■□□□□ 0.43
PCDHB7Q9Y5E2 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHB7Q9Y5E2 AC026979.3-201ENST00000607315 403 ntBASIC17.72■□□□□ 0.43
PCDHB7Q9Y5E2 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHB7Q9Y5E2 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms