Protein–RNA interactions for Protein: Q9Y2K6

USP20, Ubiquitin carboxyl-terminal hydrolase 20, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP20Q9Y2K6 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.16■□□□□ 0.5
USP20Q9Y2K6 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.16■□□□□ 0.5
USP20Q9Y2K6 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP20Q9Y2K6 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
USP20Q9Y2K6 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.16■□□□□ 0.5
USP20Q9Y2K6 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.16■□□□□ 0.5
USP20Q9Y2K6 GPS2P2-201ENST00000430745 888 ntBASIC18.16■□□□□ 0.5
USP20Q9Y2K6 AC023141.5-201ENST00000458585 616 ntBASIC18.16■□□□□ 0.5
USP20Q9Y2K6 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USP20Q9Y2K6 SLC25A39P2-201ENST00000537614 270 ntBASIC18.16■□□□□ 0.5
USP20Q9Y2K6 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.16■□□□□ 0.5
USP20Q9Y2K6 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
USP20Q9Y2K6 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.16■□□□□ 0.5
USP20Q9Y2K6 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.16■□□□□ 0.5
USP20Q9Y2K6 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.16■□□□□ 0.5
USP20Q9Y2K6 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.16■□□□□ 0.5
USP20Q9Y2K6 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.16■□□□□ 0.5
USP20Q9Y2K6 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP20Q9Y2K6 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.16■□□□□ 0.5
USP20Q9Y2K6 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP20Q9Y2K6 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.16■□□□□ 0.5
USP20Q9Y2K6 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.16■□□□□ 0.5
USP20Q9Y2K6 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP20Q9Y2K6 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP20Q9Y2K6 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP20Q9Y2K6 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.16■□□□□ 0.5
USP20Q9Y2K6 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USP20Q9Y2K6 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP20Q9Y2K6 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP20Q9Y2K6 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP20Q9Y2K6 ALOX12P2-203ENST00000570921 1945 ntBASIC18.15■□□□□ 0.5
USP20Q9Y2K6 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP20Q9Y2K6 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP20Q9Y2K6 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP20Q9Y2K6 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP20Q9Y2K6 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
USP20Q9Y2K6 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
USP20Q9Y2K6 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
USP20Q9Y2K6 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP20Q9Y2K6 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP20Q9Y2K6 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
USP20Q9Y2K6 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP20Q9Y2K6 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP20Q9Y2K6 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP20Q9Y2K6 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.15■□□□□ 0.5
USP20Q9Y2K6 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.15■□□□□ 0.5
USP20Q9Y2K6 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP20Q9Y2K6 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.15■□□□□ 0.5
USP20Q9Y2K6 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.15■□□□□ 0.5
USP20Q9Y2K6 RN7SL589P-201ENST00000481268 310 ntBASIC18.15■□□□□ 0.5
USP20Q9Y2K6 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.15■□□□□ 0.5
USP20Q9Y2K6 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.15■□□□□ 0.5
USP20Q9Y2K6 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP20Q9Y2K6 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.15■□□□□ 0.5
USP20Q9Y2K6 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP20Q9Y2K6 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP20Q9Y2K6 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP20Q9Y2K6 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP20Q9Y2K6 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP20Q9Y2K6 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.15■□□□□ 0.5
USP20Q9Y2K6 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
USP20Q9Y2K6 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP20Q9Y2K6 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP20Q9Y2K6 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
USP20Q9Y2K6 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP20Q9Y2K6 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
USP20Q9Y2K6 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.14■□□□□ 0.5
USP20Q9Y2K6 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
USP20Q9Y2K6 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
USP20Q9Y2K6 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
USP20Q9Y2K6 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.14■□□□□ 0.5
USP20Q9Y2K6 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
USP20Q9Y2K6 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
USP20Q9Y2K6 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
USP20Q9Y2K6 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
USP20Q9Y2K6 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP20Q9Y2K6 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
USP20Q9Y2K6 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.14■□□□□ 0.49
USP20Q9Y2K6 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP20Q9Y2K6 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
USP20Q9Y2K6 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP20Q9Y2K6 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USP20Q9Y2K6 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.14■□□□□ 0.49
USP20Q9Y2K6 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP20Q9Y2K6 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USP20Q9Y2K6 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
USP20Q9Y2K6 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USP20Q9Y2K6 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USP20Q9Y2K6 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USP20Q9Y2K6 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.14■□□□□ 0.49
USP20Q9Y2K6 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.14■□□□□ 0.49
USP20Q9Y2K6 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.14■□□□□ 0.49
USP20Q9Y2K6 AC106028.4-201ENST00000614509 607 ntBASIC18.14■□□□□ 0.49
USP20Q9Y2K6 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.14■□□□□ 0.49
USP20Q9Y2K6 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
USP20Q9Y2K6 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP20Q9Y2K6 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP20Q9Y2K6 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USP20Q9Y2K6 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP20Q9Y2K6 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms