Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
UBQLN2Q9UHD9 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC14.08□□□□□ -0.16
UBQLN2Q9UHD9 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.08□□□□□ -0.16
UBQLN2Q9UHD9 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBQLN2Q9UHD9 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBQLN2Q9UHD9 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.08□□□□□ -0.16
UBQLN2Q9UHD9 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC14.08□□□□□ -0.16
UBQLN2Q9UHD9 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.08□□□□□ -0.16
UBQLN2Q9UHD9 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
UBQLN2Q9UHD9 FAM87A-204ENST00000613235 858 ntBASIC14.08□□□□□ -0.16
UBQLN2Q9UHD9 AL023803.3-201ENST00000615559 522 ntBASIC14.08□□□□□ -0.16
UBQLN2Q9UHD9 AC008622.2-201ENST00000617006 1229 ntBASIC14.08□□□□□ -0.16
UBQLN2Q9UHD9 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.08□□□□□ -0.16
UBQLN2Q9UHD9 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
UBQLN2Q9UHD9 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBQLN2Q9UHD9 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBQLN2Q9UHD9 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.08□□□□□ -0.16
UBQLN2Q9UHD9 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBQLN2Q9UHD9 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.08□□□□□ -0.16
UBQLN2Q9UHD9 ASL-204ENST00000395331 1538 ntTSL 5 BASIC14.08□□□□□ -0.16
UBQLN2Q9UHD9 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBQLN2Q9UHD9 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBQLN2Q9UHD9 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBQLN2Q9UHD9 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBQLN2Q9UHD9 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBQLN2Q9UHD9 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBQLN2Q9UHD9 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBQLN2Q9UHD9 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBQLN2Q9UHD9 AC138969.2-201ENST00000532739 9932 ntBASIC14.08□□□□□ -0.16
UBQLN2Q9UHD9 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBQLN2Q9UHD9 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBQLN2Q9UHD9 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBQLN2Q9UHD9 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 AC092338.2-201ENST00000568827 1415 ntBASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 AC113347.1-201ENST00000413321 391 ntBASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 AC010203.1-204ENST00000548782 407 ntBASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 AC087386.2-201ENST00000623212 4637 ntBASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.07□□□□□ -0.16
UBQLN2Q9UHD9 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN2Q9UHD9 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.06□□□□□ -0.16
UBQLN2Q9UHD9 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
UBQLN2Q9UHD9 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
UBQLN2Q9UHD9 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN2Q9UHD9 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
UBQLN2Q9UHD9 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN2Q9UHD9 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN2Q9UHD9 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.06□□□□□ -0.16
UBQLN2Q9UHD9 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
UBQLN2Q9UHD9 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN2Q9UHD9 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
UBQLN2Q9UHD9 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN2Q9UHD9 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBQLN2Q9UHD9 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
UBQLN2Q9UHD9 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
UBQLN2Q9UHD9 HMGA1P5-201ENST00000412453 271 ntBASIC14.06□□□□□ -0.16
UBQLN2Q9UHD9 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.06□□□□□ -0.16
UBQLN2Q9UHD9 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.06□□□□□ -0.16
UBQLN2Q9UHD9 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC14.06□□□□□ -0.16
UBQLN2Q9UHD9 MCCD1P1-208ENST00000445732 328 ntBASIC14.06□□□□□ -0.16
UBQLN2Q9UHD9 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms