Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC21.73■■□□□ 1.07
PHRF1Q9P1Y6 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PHRF1Q9P1Y6 SUOX-214ENST00000551841 906 ntTSL 3 BASIC21.73■■□□□ 1.07
PHRF1Q9P1Y6 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC21.73■■□□□ 1.07
PHRF1Q9P1Y6 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC21.73■■□□□ 1.07
PHRF1Q9P1Y6 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC21.73■■□□□ 1.07
PHRF1Q9P1Y6 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PHRF1Q9P1Y6 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC21.73■■□□□ 1.07
PHRF1Q9P1Y6 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PHRF1Q9P1Y6 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PHRF1Q9P1Y6 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PHRF1Q9P1Y6 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PHRF1Q9P1Y6 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
PHRF1Q9P1Y6 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC21.73■■□□□ 1.07
PHRF1Q9P1Y6 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
PHRF1Q9P1Y6 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PHRF1Q9P1Y6 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
PHRF1Q9P1Y6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PHRF1Q9P1Y6 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PHRF1Q9P1Y6 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC21.73■■□□□ 1.07
PHRF1Q9P1Y6 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
PHRF1Q9P1Y6 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PHRF1Q9P1Y6 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PHRF1Q9P1Y6 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PHRF1Q9P1Y6 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PHRF1Q9P1Y6 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PHRF1Q9P1Y6 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PHRF1Q9P1Y6 CSF2RBP1-201ENST00000447905 391 ntBASIC21.73■■□□□ 1.07
PHRF1Q9P1Y6 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC21.73■■□□□ 1.07
PHRF1Q9P1Y6 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC21.73■■□□□ 1.07
PHRF1Q9P1Y6 GRN-214ENST00000589265 1632 ntTSL 5 BASIC21.73■■□□□ 1.07
PHRF1Q9P1Y6 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PHRF1Q9P1Y6 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PHRF1Q9P1Y6 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC21.72■■□□□ 1.07
PHRF1Q9P1Y6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PHRF1Q9P1Y6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PHRF1Q9P1Y6 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC21.72■■□□□ 1.07
PHRF1Q9P1Y6 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PHRF1Q9P1Y6 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
PHRF1Q9P1Y6 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PHRF1Q9P1Y6 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PHRF1Q9P1Y6 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PHRF1Q9P1Y6 APOC3-202ENST00000375345 604 ntTSL 5 BASIC21.72■■□□□ 1.07
PHRF1Q9P1Y6 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC21.72■■□□□ 1.07
PHRF1Q9P1Y6 AC004945.1-201ENST00000416738 983 ntBASIC21.72■■□□□ 1.07
PHRF1Q9P1Y6 ACTBP11-201ENST00000436287 1126 ntBASIC21.72■■□□□ 1.07
PHRF1Q9P1Y6 ZNF767P-206ENST00000513792 565 ntBASIC21.72■■□□□ 1.07
PHRF1Q9P1Y6 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC21.72■■□□□ 1.07
PHRF1Q9P1Y6 RIT1-205ENST00000539040 919 ntTSL 2 BASIC21.72■■□□□ 1.07
PHRF1Q9P1Y6 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC21.72■■□□□ 1.07
PHRF1Q9P1Y6 GPR182-203ENST00000622922 591 ntBASIC21.72■■□□□ 1.07
PHRF1Q9P1Y6 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC21.72■■□□□ 1.07
PHRF1Q9P1Y6 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC21.72■■□□□ 1.07
PHRF1Q9P1Y6 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PHRF1Q9P1Y6 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PHRF1Q9P1Y6 AC006538.1-201ENST00000567905 1585 ntBASIC21.72■■□□□ 1.07
PHRF1Q9P1Y6 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PHRF1Q9P1Y6 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PHRF1Q9P1Y6 AC093525.8-201ENST00000624099 1342 ntBASIC21.71■■□□□ 1.07
PHRF1Q9P1Y6 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC21.71■■□□□ 1.07
PHRF1Q9P1Y6 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC21.71■■□□□ 1.07
PHRF1Q9P1Y6 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PHRF1Q9P1Y6 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PHRF1Q9P1Y6 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PHRF1Q9P1Y6 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PHRF1Q9P1Y6 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PHRF1Q9P1Y6 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PHRF1Q9P1Y6 AC092933.1-201ENST00000393644 945 ntBASIC21.71■■□□□ 1.07
PHRF1Q9P1Y6 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PHRF1Q9P1Y6 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC21.71■■□□□ 1.07
PHRF1Q9P1Y6 RPL28-203ENST00000428193 573 ntTSL 2 BASIC21.71■■□□□ 1.07
PHRF1Q9P1Y6 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC21.71■■□□□ 1.07
PHRF1Q9P1Y6 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PHRF1Q9P1Y6 RPL28-207ENST00000558815 616 ntTSL 2 BASIC21.71■■□□□ 1.07
PHRF1Q9P1Y6 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC21.71■■□□□ 1.07
PHRF1Q9P1Y6 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC21.71■■□□□ 1.07
PHRF1Q9P1Y6 AC084346.2-201ENST00000607097 949 ntBASIC21.71■■□□□ 1.07
PHRF1Q9P1Y6 MIR6869-201ENST00000619434 62 ntBASIC21.71■■□□□ 1.07
PHRF1Q9P1Y6 CU634019.7-201ENST00000624153 1185 ntBASIC21.71■■□□□ 1.07
PHRF1Q9P1Y6 FP236241.2-201ENST00000624906 1185 ntBASIC21.71■■□□□ 1.07
PHRF1Q9P1Y6 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
PHRF1Q9P1Y6 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PHRF1Q9P1Y6 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
PHRF1Q9P1Y6 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
PHRF1Q9P1Y6 DEK-201ENST00000244776 1441 ntTSL 2 BASIC21.71■■□□□ 1.07
PHRF1Q9P1Y6 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC21.7■■□□□ 1.07
PHRF1Q9P1Y6 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
PHRF1Q9P1Y6 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PHRF1Q9P1Y6 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC21.7■■□□□ 1.06
PHRF1Q9P1Y6 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PHRF1Q9P1Y6 AC020907.1-201ENST00000616460 1350 ntBASIC21.7■■□□□ 1.06
PHRF1Q9P1Y6 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
PHRF1Q9P1Y6 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC21.7■■□□□ 1.06
PHRF1Q9P1Y6 AC005229.1-201ENST00000392885 409 ntBASIC21.7■■□□□ 1.06
PHRF1Q9P1Y6 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC21.7■■□□□ 1.06
PHRF1Q9P1Y6 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC21.7■■□□□ 1.06
PHRF1Q9P1Y6 FTH1P14-201ENST00000482930 551 ntBASIC21.7■■□□□ 1.06
PHRF1Q9P1Y6 AC104596.2-201ENST00000512793 793 ntBASIC21.7■■□□□ 1.06
PHRF1Q9P1Y6 DERL2-202ENST00000570848 657 ntTSL 5 BASIC21.7■■□□□ 1.06
PHRF1Q9P1Y6 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms