Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC23.39■■□□□ 1.33
SLC52A1Q9NWF4 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC23.39■■□□□ 1.33
SLC52A1Q9NWF4 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC23.39■■□□□ 1.33
SLC52A1Q9NWF4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
SLC52A1Q9NWF4 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC23.39■■□□□ 1.33
SLC52A1Q9NWF4 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC23.39■■□□□ 1.33
SLC52A1Q9NWF4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SLC52A1Q9NWF4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
SLC52A1Q9NWF4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
SLC52A1Q9NWF4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SLC52A1Q9NWF4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC23.39■■□□□ 1.33
SLC52A1Q9NWF4 AC006538.1-201ENST00000567905 1585 ntBASIC23.39■■□□□ 1.33
SLC52A1Q9NWF4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
SLC52A1Q9NWF4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC23.39■■□□□ 1.33
SLC52A1Q9NWF4 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC23.39■■□□□ 1.33
SLC52A1Q9NWF4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SLC52A1Q9NWF4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SLC52A1Q9NWF4 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC23.38■■□□□ 1.33
SLC52A1Q9NWF4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
SLC52A1Q9NWF4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
SLC52A1Q9NWF4 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SLC52A1Q9NWF4 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
SLC52A1Q9NWF4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
SLC52A1Q9NWF4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
SLC52A1Q9NWF4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
SLC52A1Q9NWF4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
SLC52A1Q9NWF4 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC23.38■■□□□ 1.33
SLC52A1Q9NWF4 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SLC52A1Q9NWF4 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SLC52A1Q9NWF4 KRT43P-201ENST00000434019 910 ntBASIC23.38■■□□□ 1.33
SLC52A1Q9NWF4 BNIP3P42-201ENST00000454982 569 ntBASIC23.38■■□□□ 1.33
SLC52A1Q9NWF4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
SLC52A1Q9NWF4 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC23.38■■□□□ 1.33
SLC52A1Q9NWF4 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC23.38■■□□□ 1.33
SLC52A1Q9NWF4 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SLC52A1Q9NWF4 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
SLC52A1Q9NWF4 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC23.38■■□□□ 1.33
SLC52A1Q9NWF4 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC23.38■■□□□ 1.33
SLC52A1Q9NWF4 BNIP3P29-201ENST00000598302 571 ntBASIC23.38■■□□□ 1.33
SLC52A1Q9NWF4 AC233724.13-201ENST00000598383 410 ntBASIC23.38■■□□□ 1.33
SLC52A1Q9NWF4 AC011447.5-201ENST00000616168 564 ntBASIC23.38■■□□□ 1.33
SLC52A1Q9NWF4 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
SLC52A1Q9NWF4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
SLC52A1Q9NWF4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC23.38■■□□□ 1.33
SLC52A1Q9NWF4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SLC52A1Q9NWF4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
SLC52A1Q9NWF4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SLC52A1Q9NWF4 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SLC52A1Q9NWF4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC23.38■■□□□ 1.33
SLC52A1Q9NWF4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC23.38■■□□□ 1.33
SLC52A1Q9NWF4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SLC52A1Q9NWF4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SLC52A1Q9NWF4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC23.37■■□□□ 1.33
SLC52A1Q9NWF4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SLC52A1Q9NWF4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC23.37■■□□□ 1.33
SLC52A1Q9NWF4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SLC52A1Q9NWF4 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SLC52A1Q9NWF4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SLC52A1Q9NWF4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SLC52A1Q9NWF4 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC23.37■■□□□ 1.33
SLC52A1Q9NWF4 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SLC52A1Q9NWF4 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SLC52A1Q9NWF4 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
SLC52A1Q9NWF4 AL442647.2-201ENST00000429864 857 ntBASIC23.37■■□□□ 1.33
SLC52A1Q9NWF4 FXR1-221ENST00000491674 365 ntTSL 2 BASIC23.37■■□□□ 1.33
SLC52A1Q9NWF4 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC23.37■■□□□ 1.33
SLC52A1Q9NWF4 WNT11-204ENST00000621122 789 ntTSL 5 BASIC23.37■■□□□ 1.33
SLC52A1Q9NWF4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SLC52A1Q9NWF4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SLC52A1Q9NWF4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SLC52A1Q9NWF4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SLC52A1Q9NWF4 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC23.37■■□□□ 1.33
SLC52A1Q9NWF4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
SLC52A1Q9NWF4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
SLC52A1Q9NWF4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SLC52A1Q9NWF4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SLC52A1Q9NWF4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC23.36■■□□□ 1.33
SLC52A1Q9NWF4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SLC52A1Q9NWF4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SLC52A1Q9NWF4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SLC52A1Q9NWF4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
SLC52A1Q9NWF4 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SLC52A1Q9NWF4 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
SLC52A1Q9NWF4 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
SLC52A1Q9NWF4 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SLC52A1Q9NWF4 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC23.36■■□□□ 1.33
SLC52A1Q9NWF4 EEF1DP4-201ENST00000446006 880 ntBASIC23.36■■□□□ 1.33
SLC52A1Q9NWF4 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC23.36■■□□□ 1.33
SLC52A1Q9NWF4 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC23.36■■□□□ 1.33
SLC52A1Q9NWF4 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC23.36■■□□□ 1.33
SLC52A1Q9NWF4 PFAS-212ENST00000625942 396 ntTSL 5 BASIC23.36■■□□□ 1.33
SLC52A1Q9NWF4 ABBA01031660.1-201ENST00000635219 756 ntBASIC23.36■■□□□ 1.33
SLC52A1Q9NWF4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
SLC52A1Q9NWF4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
SLC52A1Q9NWF4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
SLC52A1Q9NWF4 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC23.36■■□□□ 1.33
SLC52A1Q9NWF4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
SLC52A1Q9NWF4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC23.36■■□□□ 1.33
SLC52A1Q9NWF4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SLC52A1Q9NWF4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms