Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM7Q9NR12 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM7Q9NR12 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM7Q9NR12 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.41■□□□□ 0.54
PDLIM7Q9NR12 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM7Q9NR12 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM7Q9NR12 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.41■□□□□ 0.54
PDLIM7Q9NR12 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM7Q9NR12 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM7Q9NR12 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM7Q9NR12 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM7Q9NR12 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 CETN4P-206ENST00000642099 2168 ntBASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 AC106886.4-201ENST00000623557 2502 ntBASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 MIR658-201ENST00000385210 100 ntBASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 RPL37AP1-201ENST00000412502 279 ntBASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 DFFBP1-201ENST00000433250 979 ntBASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM7Q9NR12 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.54
PDLIM7Q9NR12 FOXO1B-201ENST00000504678 1527 ntBASIC18.39■□□□□ 0.54
PDLIM7Q9NR12 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PDLIM7Q9NR12 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDLIM7Q9NR12 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDLIM7Q9NR12 AL031731.1-201ENST00000642131 2094 ntBASIC18.39■□□□□ 0.53
PDLIM7Q9NR12 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
PDLIM7Q9NR12 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.39■□□□□ 0.53
PDLIM7Q9NR12 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDLIM7Q9NR12 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.39■□□□□ 0.53
PDLIM7Q9NR12 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.39■□□□□ 0.53
PDLIM7Q9NR12 WASH4P-201ENST00000564273 1246 ntBASIC18.39■□□□□ 0.53
PDLIM7Q9NR12 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.39■□□□□ 0.53
PDLIM7Q9NR12 GGT4P-201ENST00000623672 1708 ntBASIC18.39■□□□□ 0.53
PDLIM7Q9NR12 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
PDLIM7Q9NR12 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDLIM7Q9NR12 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
PDLIM7Q9NR12 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.39■□□□□ 0.53
PDLIM7Q9NR12 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDLIM7Q9NR12 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDLIM7Q9NR12 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDLIM7Q9NR12 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDLIM7Q9NR12 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDLIM7Q9NR12 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.39■□□□□ 0.53
PDLIM7Q9NR12 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.39■□□□□ 0.53
PDLIM7Q9NR12 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDLIM7Q9NR12 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PDLIM7Q9NR12 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.39■□□□□ 0.53
PDLIM7Q9NR12 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDLIM7Q9NR12 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.39■□□□□ 0.53
PDLIM7Q9NR12 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDLIM7Q9NR12 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.39■□□□□ 0.53
PDLIM7Q9NR12 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDLIM7Q9NR12 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDLIM7Q9NR12 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.39■□□□□ 0.53
PDLIM7Q9NR12 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDLIM7Q9NR12 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDLIM7Q9NR12 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PDLIM7Q9NR12 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.38■□□□□ 0.53
PDLIM7Q9NR12 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDLIM7Q9NR12 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDLIM7Q9NR12 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.38■□□□□ 0.53
PDLIM7Q9NR12 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDLIM7Q9NR12 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDLIM7Q9NR12 HLA-H-201ENST00000383620 1096 ntBASIC18.38■□□□□ 0.53
PDLIM7Q9NR12 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDLIM7Q9NR12 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDLIM7Q9NR12 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDLIM7Q9NR12 AC135586.1-201ENST00000539323 574 ntBASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms