Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMG20AQ9NP66 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HMG20AQ9NP66 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMG20AQ9NP66 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMG20AQ9NP66 FAM8A6P-201ENST00000407496 1135 ntBASIC15.15■□□□□ 0.02
HMG20AQ9NP66 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HMG20AQ9NP66 KRT18P48-201ENST00000434763 852 ntBASIC15.15■□□□□ 0.02
HMG20AQ9NP66 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMG20AQ9NP66 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
HMG20AQ9NP66 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMG20AQ9NP66 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.15■□□□□ 0.02
HMG20AQ9NP66 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.15■□□□□ 0.02
HMG20AQ9NP66 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.15■□□□□ 0.02
HMG20AQ9NP66 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMG20AQ9NP66 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.15■□□□□ 0.02
HMG20AQ9NP66 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
HMG20AQ9NP66 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HMG20AQ9NP66 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMG20AQ9NP66 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMG20AQ9NP66 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMG20AQ9NP66 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMG20AQ9NP66 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMG20AQ9NP66 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMG20AQ9NP66 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMG20AQ9NP66 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
HMG20AQ9NP66 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.15■□□□□ 0.02
HMG20AQ9NP66 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HMG20AQ9NP66 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
HMG20AQ9NP66 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
HMG20AQ9NP66 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HMG20AQ9NP66 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.15■□□□□ 0.02
HMG20AQ9NP66 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 AC005521.1-201ENST00000393351 872 ntBASIC15.14■□□□□ 0.01
HMG20AQ9NP66 AC117947.1-201ENST00000427448 529 ntBASIC15.14■□□□□ 0.01
HMG20AQ9NP66 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 AC007292.2-201ENST00000593524 1812 ntBASIC15.14■□□□□ 0.01
HMG20AQ9NP66 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
HMG20AQ9NP66 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HMG20AQ9NP66 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.13■□□□□ 0.01
HMG20AQ9NP66 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HMG20AQ9NP66 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMG20AQ9NP66 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMG20AQ9NP66 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.13■□□□□ 0.01
HMG20AQ9NP66 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.13■□□□□ 0.01
HMG20AQ9NP66 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HMG20AQ9NP66 C8orf49-201ENST00000525043 1968 ntBASIC15.13■□□□□ 0.01
HMG20AQ9NP66 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms