Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP6V0A4Q9HBG4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.44■□□□□ 0.54
ATP6V0A4Q9HBG4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
ATP6V0A4Q9HBG4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP6V0A4Q9HBG4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
ATP6V0A4Q9HBG4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.44■□□□□ 0.54
ATP6V0A4Q9HBG4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 AC078925.2-201ENST00000624013 1973 ntBASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 HLA-J-202ENST00000469281 1241 ntBASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 KRT18P34-201ENST00000488218 1270 ntBASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 AC093520.2-201ENST00000561830 333 ntBASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 AL512652.2-201ENST00000625156 1716 ntBASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP6V0A4Q9HBG4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 AL592309.1-201ENST00000443127 649 ntBASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 FAM86GP-201ENST00000448322 971 ntBASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 AC009093.7-201ENST00000623853 1223 ntBASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 RNF216P1-203ENST00000404404 2427 ntBASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 AC006538.1-201ENST00000567905 1585 ntBASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 AC022211.2-201ENST00000585075 2527 ntBASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATP6V0A4Q9HBG4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ATP6V0A4Q9HBG4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
ATP6V0A4Q9HBG4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ATP6V0A4Q9HBG4 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATP6V0A4Q9HBG4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ATP6V0A4Q9HBG4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
ATP6V0A4Q9HBG4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATP6V0A4Q9HBG4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATP6V0A4Q9HBG4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
ATP6V0A4Q9HBG4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATP6V0A4Q9HBG4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ATP6V0A4Q9HBG4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATP6V0A4Q9HBG4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms