Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
UPF2Q9HAU5 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
UPF2Q9HAU5 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UPF2Q9HAU5 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UPF2Q9HAU5 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UPF2Q9HAU5 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
UPF2Q9HAU5 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UPF2Q9HAU5 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC20.43■□□□□ 0.86
UPF2Q9HAU5 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UPF2Q9HAU5 SLC9A7P1-201ENST00000554295 3311 ntBASIC20.43■□□□□ 0.86
UPF2Q9HAU5 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
UPF2Q9HAU5 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
UPF2Q9HAU5 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
UPF2Q9HAU5 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.43■□□□□ 0.86
UPF2Q9HAU5 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UPF2Q9HAU5 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UPF2Q9HAU5 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.43■□□□□ 0.86
UPF2Q9HAU5 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
UPF2Q9HAU5 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC20.43■□□□□ 0.86
UPF2Q9HAU5 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
UPF2Q9HAU5 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.43■□□□□ 0.86
UPF2Q9HAU5 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UPF2Q9HAU5 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC20.43■□□□□ 0.86
UPF2Q9HAU5 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
UPF2Q9HAU5 AL671710.1-201ENST00000610245 2349 ntBASIC20.43■□□□□ 0.86
UPF2Q9HAU5 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
UPF2Q9HAU5 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
UPF2Q9HAU5 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UPF2Q9HAU5 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
UPF2Q9HAU5 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC20.43■□□□□ 0.86
UPF2Q9HAU5 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UPF2Q9HAU5 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
UPF2Q9HAU5 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC20.43■□□□□ 0.86
UPF2Q9HAU5 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC20.42■□□□□ 0.86
UPF2Q9HAU5 AC004817.3-201ENST00000602957 2129 ntBASIC20.42■□□□□ 0.86
UPF2Q9HAU5 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
UPF2Q9HAU5 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPF2Q9HAU5 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPF2Q9HAU5 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
UPF2Q9HAU5 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPF2Q9HAU5 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPF2Q9HAU5 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC20.42■□□□□ 0.86
UPF2Q9HAU5 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPF2Q9HAU5 AL513477.1-201ENST00000602865 2407 ntBASIC20.42■□□□□ 0.86
UPF2Q9HAU5 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPF2Q9HAU5 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPF2Q9HAU5 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPF2Q9HAU5 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPF2Q9HAU5 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
UPF2Q9HAU5 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
UPF2Q9HAU5 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
UPF2Q9HAU5 CHCHD2P8-201ENST00000429873 447 ntBASIC20.42■□□□□ 0.86
UPF2Q9HAU5 BX276092.5-203ENST00000456199 560 ntBASIC20.42■□□□□ 0.86
UPF2Q9HAU5 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPF2Q9HAU5 AC096582.2-201ENST00000510860 516 ntBASIC20.42■□□□□ 0.86
UPF2Q9HAU5 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.42■□□□□ 0.86
UPF2Q9HAU5 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.42■□□□□ 0.86
UPF2Q9HAU5 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
UPF2Q9HAU5 NTF6B-201ENST00000591913 560 ntBASIC20.42■□□□□ 0.86
UPF2Q9HAU5 TERC-201ENST00000602385 541 ntBASIC20.42■□□□□ 0.86
UPF2Q9HAU5 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
UPF2Q9HAU5 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
UPF2Q9HAU5 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.42■□□□□ 0.86
UPF2Q9HAU5 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
UPF2Q9HAU5 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPF2Q9HAU5 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC20.42■□□□□ 0.86
UPF2Q9HAU5 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPF2Q9HAU5 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.42■□□□□ 0.86
UPF2Q9HAU5 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPF2Q9HAU5 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
UPF2Q9HAU5 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPF2Q9HAU5 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.42■□□□□ 0.86
UPF2Q9HAU5 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPF2Q9HAU5 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPF2Q9HAU5 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
UPF2Q9HAU5 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UPF2Q9HAU5 HARS-203ENST00000431330 1774 ntTSL 2 BASIC20.41■□□□□ 0.86
UPF2Q9HAU5 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UPF2Q9HAU5 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UPF2Q9HAU5 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC20.41■□□□□ 0.86
UPF2Q9HAU5 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UPF2Q9HAU5 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
UPF2Q9HAU5 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC20.41■□□□□ 0.86
UPF2Q9HAU5 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
UPF2Q9HAU5 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
UPF2Q9HAU5 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UPF2Q9HAU5 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UPF2Q9HAU5 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UPF2Q9HAU5 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.41■□□□□ 0.86
UPF2Q9HAU5 AC022616.7-201ENST00000525383 220 ntBASIC20.41■□□□□ 0.86
UPF2Q9HAU5 AP005901.3-202ENST00000581653 237 ntBASIC20.41■□□□□ 0.86
UPF2Q9HAU5 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.41■□□□□ 0.86
UPF2Q9HAU5 Z69720.1-201ENST00000601483 472 ntBASIC20.41■□□□□ 0.86
UPF2Q9HAU5 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UPF2Q9HAU5 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UPF2Q9HAU5 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
UPF2Q9HAU5 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
UPF2Q9HAU5 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC20.41■□□□□ 0.86
UPF2Q9HAU5 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
UPF2Q9HAU5 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms