Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 KRT8P12-202ENST00000472924 1397 ntBASIC18■□□□□ 0.47
HIPK3Q9H422 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HIPK3Q9H422 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HIPK3Q9H422 PC-204ENST00000524491 1714 ntTSL 2 BASIC18■□□□□ 0.47
HIPK3Q9H422 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HIPK3Q9H422 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HIPK3Q9H422 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HIPK3Q9H422 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18■□□□□ 0.47
HIPK3Q9H422 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HIPK3Q9H422 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HIPK3Q9H422 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
HIPK3Q9H422 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.99■□□□□ 0.47
HIPK3Q9H422 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.99■□□□□ 0.47
HIPK3Q9H422 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.99■□□□□ 0.47
HIPK3Q9H422 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.99■□□□□ 0.47
HIPK3Q9H422 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HIPK3Q9H422 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HIPK3Q9H422 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.99■□□□□ 0.47
HIPK3Q9H422 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HIPK3Q9H422 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
HIPK3Q9H422 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
HIPK3Q9H422 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
HIPK3Q9H422 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
HIPK3Q9H422 ELK1P1-201ENST00000485699 580 ntBASIC17.99■□□□□ 0.47
HIPK3Q9H422 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.99■□□□□ 0.47
HIPK3Q9H422 AC123567.1-201ENST00000548294 1261 ntBASIC17.99■□□□□ 0.47
HIPK3Q9H422 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.99■□□□□ 0.47
HIPK3Q9H422 AC023310.3-201ENST00000557027 670 ntBASIC17.99■□□□□ 0.47
HIPK3Q9H422 AC100756.1-201ENST00000562736 682 ntBASIC17.99■□□□□ 0.47
HIPK3Q9H422 AC138749.3-201ENST00000567691 622 ntBASIC17.99■□□□□ 0.47
HIPK3Q9H422 AC024267.1-201ENST00000582320 895 ntBASIC17.99■□□□□ 0.47
HIPK3Q9H422 CTBP2P3-201ENST00000585629 1255 ntBASIC17.99■□□□□ 0.47
HIPK3Q9H422 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
HIPK3Q9H422 AC026979.3-201ENST00000607315 403 ntBASIC17.99■□□□□ 0.47
HIPK3Q9H422 AC099568.2-201ENST00000609194 695 ntBASIC17.99■□□□□ 0.47
HIPK3Q9H422 AC116165.1-201ENST00000611806 668 ntBASIC17.99■□□□□ 0.47
HIPK3Q9H422 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HIPK3Q9H422 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HIPK3Q9H422 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
HIPK3Q9H422 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HIPK3Q9H422 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HIPK3Q9H422 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
HIPK3Q9H422 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HIPK3Q9H422 AL138688.1-201ENST00000624851 1594 ntBASIC17.99■□□□□ 0.47
HIPK3Q9H422 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HIPK3Q9H422 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HIPK3Q9H422 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HIPK3Q9H422 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HIPK3Q9H422 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HIPK3Q9H422 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HIPK3Q9H422 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HIPK3Q9H422 KRT8P39-201ENST00000396270 1433 ntBASIC17.98■□□□□ 0.47
HIPK3Q9H422 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK3Q9H422 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
HIPK3Q9H422 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK3Q9H422 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK3Q9H422 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK3Q9H422 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
HIPK3Q9H422 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.98■□□□□ 0.47
HIPK3Q9H422 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK3Q9H422 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK3Q9H422 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK3Q9H422 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.98■□□□□ 0.47
HIPK3Q9H422 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK3Q9H422 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
HIPK3Q9H422 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK3Q9H422 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK3Q9H422 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK3Q9H422 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK3Q9H422 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
HIPK3Q9H422 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.98■□□□□ 0.47
HIPK3Q9H422 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
HIPK3Q9H422 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.98■□□□□ 0.47
HIPK3Q9H422 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.98■□□□□ 0.47
HIPK3Q9H422 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK3Q9H422 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
HIPK3Q9H422 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
HIPK3Q9H422 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.98■□□□□ 0.47
HIPK3Q9H422 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK3Q9H422 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.98■□□□□ 0.47
HIPK3Q9H422 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK3Q9H422 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK3Q9H422 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.98■□□□□ 0.47
HIPK3Q9H422 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK3Q9H422 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK3Q9H422 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.98■□□□□ 0.47
HIPK3Q9H422 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK3Q9H422 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK3Q9H422 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
HIPK3Q9H422 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK3Q9H422 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.98■□□□□ 0.47
HIPK3Q9H422 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK3Q9H422 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
HIPK3Q9H422 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK3Q9H422 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
HIPK3Q9H422 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.98■□□□□ 0.47
HIPK3Q9H422 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK3Q9H422 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HIPK3Q9H422 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.97■□□□□ 0.47
HIPK3Q9H422 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms