Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 AP001350.2-201ENST00000625104 1094 ntBASIC16.7■□□□□ 0.26
CCDC68Q9H2F9 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC68Q9H2F9 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC68Q9H2F9 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC68Q9H2F9 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC68Q9H2F9 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC68Q9H2F9 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC68Q9H2F9 AC068418.2-201ENST00000577309 3703 ntBASIC16.7■□□□□ 0.26
CCDC68Q9H2F9 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC68Q9H2F9 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC68Q9H2F9 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC68Q9H2F9 PCDHB19P-201ENST00000570871 2371 ntBASIC16.7■□□□□ 0.26
CCDC68Q9H2F9 MIR600HG-201ENST00000449175 5984 ntBASIC16.7■□□□□ 0.26
CCDC68Q9H2F9 AC129492.6-201ENST00000611383 1305 ntBASIC16.7■□□□□ 0.26
CCDC68Q9H2F9 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 REXO1L3P-201ENST00000622202 1288 ntBASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 AC131009.4-201ENST00000624048 1740 ntBASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC68Q9H2F9 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC68Q9H2F9 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC68Q9H2F9 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC68Q9H2F9 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC68Q9H2F9 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC68Q9H2F9 AL353732.1-201ENST00000569618 1459 ntBASIC16.68■□□□□ 0.26
CCDC68Q9H2F9 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC68Q9H2F9 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC68Q9H2F9 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC68Q9H2F9 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC68Q9H2F9 AC007326.2-201ENST00000624224 7579 ntBASIC16.68■□□□□ 0.26
CCDC68Q9H2F9 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC68Q9H2F9 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC68Q9H2F9 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC68Q9H2F9 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC68Q9H2F9 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC68Q9H2F9 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC68Q9H2F9 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
CCDC68Q9H2F9 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC68Q9H2F9 SLC25A6P2-201ENST00000497974 877 ntBASIC16.68■□□□□ 0.26
CCDC68Q9H2F9 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.68■□□□□ 0.26
CCDC68Q9H2F9 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.68■□□□□ 0.26
CCDC68Q9H2F9 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC68Q9H2F9 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CCDC68Q9H2F9 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CCDC68Q9H2F9 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CCDC68Q9H2F9 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CCDC68Q9H2F9 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
CCDC68Q9H2F9 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
CCDC68Q9H2F9 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC68Q9H2F9 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC68Q9H2F9 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC68Q9H2F9 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC68Q9H2F9 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC68Q9H2F9 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CCDC68Q9H2F9 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CCDC68Q9H2F9 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC68Q9H2F9 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC68Q9H2F9 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC68Q9H2F9 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC68Q9H2F9 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
CCDC68Q9H2F9 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms