Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RTFDC1Q9BY42 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTFDC1Q9BY42 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTFDC1Q9BY42 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTFDC1Q9BY42 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTFDC1Q9BY42 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTFDC1Q9BY42 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTFDC1Q9BY42 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTFDC1Q9BY42 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTFDC1Q9BY42 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.92■□□□□ 0.78
RTFDC1Q9BY42 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTFDC1Q9BY42 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.92■□□□□ 0.78
RTFDC1Q9BY42 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RTFDC1Q9BY42 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.92■□□□□ 0.78
RTFDC1Q9BY42 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RTFDC1Q9BY42 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.92■□□□□ 0.78
RTFDC1Q9BY42 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTFDC1Q9BY42 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTFDC1Q9BY42 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTFDC1Q9BY42 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC19.92■□□□□ 0.78
RTFDC1Q9BY42 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RTFDC1Q9BY42 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
RTFDC1Q9BY42 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RTFDC1Q9BY42 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC19.92■□□□□ 0.78
RTFDC1Q9BY42 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
RTFDC1Q9BY42 TMEM14DP-201ENST00000422205 345 ntBASIC19.92■□□□□ 0.78
RTFDC1Q9BY42 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.92■□□□□ 0.78
RTFDC1Q9BY42 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC19.92■□□□□ 0.78
RTFDC1Q9BY42 FADS2-205ENST00000517839 469 ntTSL 3 BASIC19.92■□□□□ 0.78
RTFDC1Q9BY42 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC19.92■□□□□ 0.78
RTFDC1Q9BY42 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RTFDC1Q9BY42 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC19.92■□□□□ 0.78
RTFDC1Q9BY42 TMEM261P1-201ENST00000604899 340 ntBASIC19.92■□□□□ 0.78
RTFDC1Q9BY42 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RTFDC1Q9BY42 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.92■□□□□ 0.78
RTFDC1Q9BY42 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RTFDC1Q9BY42 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTFDC1Q9BY42 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTFDC1Q9BY42 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RTFDC1Q9BY42 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTFDC1Q9BY42 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.91■□□□□ 0.78
RTFDC1Q9BY42 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.91■□□□□ 0.78
RTFDC1Q9BY42 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RTFDC1Q9BY42 RAD18-204ENST00000418463 563 ntTSL 4 BASIC19.91■□□□□ 0.78
RTFDC1Q9BY42 RAD18-205ENST00000421052 582 ntTSL 3 BASIC19.91■□□□□ 0.78
RTFDC1Q9BY42 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
RTFDC1Q9BY42 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC19.91■□□□□ 0.78
RTFDC1Q9BY42 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RTFDC1Q9BY42 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC19.91■□□□□ 0.78
RTFDC1Q9BY42 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC19.91■□□□□ 0.78
RTFDC1Q9BY42 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RTFDC1Q9BY42 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RTFDC1Q9BY42 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
RTFDC1Q9BY42 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RTFDC1Q9BY42 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RTFDC1Q9BY42 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTFDC1Q9BY42 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTFDC1Q9BY42 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTFDC1Q9BY42 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RTFDC1Q9BY42 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RTFDC1Q9BY42 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.91■□□□□ 0.78
RTFDC1Q9BY42 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTFDC1Q9BY42 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
RTFDC1Q9BY42 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTFDC1Q9BY42 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTFDC1Q9BY42 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
RTFDC1Q9BY42 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.9■□□□□ 0.78
RTFDC1Q9BY42 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.9■□□□□ 0.78
RTFDC1Q9BY42 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTFDC1Q9BY42 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.9■□□□□ 0.78
RTFDC1Q9BY42 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.9■□□□□ 0.78
RTFDC1Q9BY42 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.9■□□□□ 0.78
RTFDC1Q9BY42 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTFDC1Q9BY42 NSL1-201ENST00000366976 722 ntTSL 2 BASIC19.9■□□□□ 0.78
RTFDC1Q9BY42 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC19.9■□□□□ 0.78
RTFDC1Q9BY42 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC19.9■□□□□ 0.78
RTFDC1Q9BY42 AL139010.1-201ENST00000454878 894 ntBASIC19.9■□□□□ 0.78
RTFDC1Q9BY42 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC19.9■□□□□ 0.78
RTFDC1Q9BY42 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
RTFDC1Q9BY42 WFDC1-204ENST00000613603 549 ntBASIC19.9■□□□□ 0.78
RTFDC1Q9BY42 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTFDC1Q9BY42 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTFDC1Q9BY42 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTFDC1Q9BY42 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RTFDC1Q9BY42 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTFDC1Q9BY42 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTFDC1Q9BY42 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.9■□□□□ 0.78
RTFDC1Q9BY42 AC060834.1-201ENST00000443027 2032 ntBASIC19.9■□□□□ 0.78
RTFDC1Q9BY42 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
RTFDC1Q9BY42 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTFDC1Q9BY42 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTFDC1Q9BY42 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTFDC1Q9BY42 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTFDC1Q9BY42 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTFDC1Q9BY42 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19.89■□□□□ 0.77
RTFDC1Q9BY42 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTFDC1Q9BY42 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.89■□□□□ 0.77
RTFDC1Q9BY42 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RTFDC1Q9BY42 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC19.89■□□□□ 0.77
RTFDC1Q9BY42 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms