Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AC108073.2-201ENST00000464002 357 ntBASIC14.74□□□□□ -0.05
VRK1Q99986 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.74□□□□□ -0.05
VRK1Q99986 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.74□□□□□ -0.05
VRK1Q99986 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.74□□□□□ -0.05
VRK1Q99986 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.74□□□□□ -0.05
VRK1Q99986 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.74□□□□□ -0.05
VRK1Q99986 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.74□□□□□ -0.05
VRK1Q99986 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VRK1Q99986 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VRK1Q99986 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.74□□□□□ -0.05
VRK1Q99986 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
VRK1Q99986 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.74□□□□□ -0.05
VRK1Q99986 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
VRK1Q99986 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VRK1Q99986 REXO1L11P-201ENST00000620964 1927 ntBASIC14.74□□□□□ -0.05
VRK1Q99986 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
VRK1Q99986 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VRK1Q99986 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
VRK1Q99986 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
VRK1Q99986 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
VRK1Q99986 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VRK1Q99986 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.73□□□□□ -0.05
VRK1Q99986 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VRK1Q99986 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.73□□□□□ -0.05
VRK1Q99986 AC046185.3-201ENST00000623228 1824 ntBASIC14.73□□□□□ -0.05
VRK1Q99986 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VRK1Q99986 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
VRK1Q99986 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VRK1Q99986 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
VRK1Q99986 AC060834.1-201ENST00000443027 2032 ntBASIC14.73□□□□□ -0.05
VRK1Q99986 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
VRK1Q99986 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
VRK1Q99986 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VRK1Q99986 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
VRK1Q99986 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
VRK1Q99986 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.73□□□□□ -0.05
VRK1Q99986 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VRK1Q99986 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VRK1Q99986 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
VRK1Q99986 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VRK1Q99986 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VRK1Q99986 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VRK1Q99986 AC005104.2-201ENST00000427818 678 ntBASIC14.73□□□□□ -0.05
VRK1Q99986 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
VRK1Q99986 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.73□□□□□ -0.05
VRK1Q99986 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VRK1Q99986 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.73□□□□□ -0.05
VRK1Q99986 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
VRK1Q99986 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.73□□□□□ -0.05
VRK1Q99986 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.73□□□□□ -0.05
VRK1Q99986 AC010327.4-202ENST00000591484 748 ntBASIC14.73□□□□□ -0.05
VRK1Q99986 AC004790.2-201ENST00000623588 572 ntBASIC14.73□□□□□ -0.05
VRK1Q99986 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
VRK1Q99986 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VRK1Q99986 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VRK1Q99986 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VRK1Q99986 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
VRK1Q99986 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.73□□□□□ -0.05
VRK1Q99986 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VRK1Q99986 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.73□□□□□ -0.05
VRK1Q99986 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.73□□□□□ -0.05
VRK1Q99986 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VRK1Q99986 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VRK1Q99986 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
VRK1Q99986 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.73□□□□□ -0.05
VRK1Q99986 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VRK1Q99986 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VRK1Q99986 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VRK1Q99986 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VRK1Q99986 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
VRK1Q99986 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VRK1Q99986 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VRK1Q99986 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
VRK1Q99986 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VRK1Q99986 AC007950.2-201ENST00000615045 2347 ntBASIC14.72□□□□□ -0.05
VRK1Q99986 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
VRK1Q99986 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VRK1Q99986 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
VRK1Q99986 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.72□□□□□ -0.05
VRK1Q99986 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
VRK1Q99986 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VRK1Q99986 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VRK1Q99986 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VRK1Q99986 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
VRK1Q99986 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
VRK1Q99986 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.72□□□□□ -0.05
VRK1Q99986 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.72□□□□□ -0.05
VRK1Q99986 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VRK1Q99986 PTCHD3P3-201ENST00000403073 906 ntBASIC14.72□□□□□ -0.05
VRK1Q99986 DNAJB3-201ENST00000446806 729 ntBASIC14.72□□□□□ -0.05
VRK1Q99986 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.72□□□□□ -0.05
VRK1Q99986 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.72□□□□□ -0.05
VRK1Q99986 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.72□□□□□ -0.05
VRK1Q99986 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.72□□□□□ -0.05
VRK1Q99986 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.72□□□□□ -0.05
VRK1Q99986 AC002347.1-201ENST00000569543 541 ntBASIC14.72□□□□□ -0.05
VRK1Q99986 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.72□□□□□ -0.05
VRK1Q99986 AC008667.4-201ENST00000607370 168 ntBASIC14.72□□□□□ -0.05
VRK1Q99986 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
VRK1Q99986 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms