Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 SPTSSB-204ENST00000617024 1292 ntBASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK5RAP1Q96SZ6 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDK5RAP1Q96SZ6 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CDK5RAP1Q96SZ6 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CDK5RAP1Q96SZ6 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDK5RAP1Q96SZ6 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDK5RAP1Q96SZ6 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CDK5RAP1Q96SZ6 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDK5RAP1Q96SZ6 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CDK5RAP1Q96SZ6 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDK5RAP1Q96SZ6 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDK5RAP1Q96SZ6 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDK5RAP1Q96SZ6 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDK5RAP1Q96SZ6 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CDK5RAP1Q96SZ6 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.16■□□□□ 0.34
CDK5RAP1Q96SZ6 SPDYE14P-201ENST00000442619 822 ntBASIC17.16■□□□□ 0.34
CDK5RAP1Q96SZ6 AC093724.1-201ENST00000448659 1027 ntBASIC17.16■□□□□ 0.34
CDK5RAP1Q96SZ6 CYMP-203ENST00000474680 1263 ntBASIC17.16■□□□□ 0.34
CDK5RAP1Q96SZ6 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.16■□□□□ 0.34
CDK5RAP1Q96SZ6 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.16■□□□□ 0.34
CDK5RAP1Q96SZ6 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.16■□□□□ 0.34
CDK5RAP1Q96SZ6 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.16■□□□□ 0.34
CDK5RAP1Q96SZ6 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.16■□□□□ 0.34
CDK5RAP1Q96SZ6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDK5RAP1Q96SZ6 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDK5RAP1Q96SZ6 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.16■□□□□ 0.34
CDK5RAP1Q96SZ6 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDK5RAP1Q96SZ6 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDK5RAP1Q96SZ6 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDK5RAP1Q96SZ6 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CDK5RAP1Q96SZ6 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDK5RAP1Q96SZ6 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.16■□□□□ 0.34
CDK5RAP1Q96SZ6 PCGF3-213ENST00000620529 1899 ntBASIC17.16■□□□□ 0.34
CDK5RAP1Q96SZ6 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDK5RAP1Q96SZ6 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDK5RAP1Q96SZ6 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDK5RAP1Q96SZ6 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.15■□□□□ 0.34
CDK5RAP1Q96SZ6 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CDK5RAP1Q96SZ6 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDK5RAP1Q96SZ6 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDK5RAP1Q96SZ6 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDK5RAP1Q96SZ6 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDK5RAP1Q96SZ6 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDK5RAP1Q96SZ6 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDK5RAP1Q96SZ6 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDK5RAP1Q96SZ6 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.15■□□□□ 0.34
CDK5RAP1Q96SZ6 FAM220BP-201ENST00000377689 816 ntBASIC17.15■□□□□ 0.34
CDK5RAP1Q96SZ6 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDK5RAP1Q96SZ6 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.15■□□□□ 0.34
CDK5RAP1Q96SZ6 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDK5RAP1Q96SZ6 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.15■□□□□ 0.34
CDK5RAP1Q96SZ6 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.15■□□□□ 0.34
CDK5RAP1Q96SZ6 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.15■□□□□ 0.34
CDK5RAP1Q96SZ6 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.15■□□□□ 0.34
CDK5RAP1Q96SZ6 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDK5RAP1Q96SZ6 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.15■□□□□ 0.34
CDK5RAP1Q96SZ6 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
CDK5RAP1Q96SZ6 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.15■□□□□ 0.34
CDK5RAP1Q96SZ6 Z92544.3-201ENST00000624747 417 ntBASIC17.15■□□□□ 0.34
CDK5RAP1Q96SZ6 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.15■□□□□ 0.34
CDK5RAP1Q96SZ6 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.15■□□□□ 0.34
CDK5RAP1Q96SZ6 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDK5RAP1Q96SZ6 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDK5RAP1Q96SZ6 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CDK5RAP1Q96SZ6 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CDK5RAP1Q96SZ6 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.15■□□□□ 0.34
CDK5RAP1Q96SZ6 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDK5RAP1Q96SZ6 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CDK5RAP1Q96SZ6 AC078925.2-201ENST00000624013 1973 ntBASIC17.15■□□□□ 0.34
CDK5RAP1Q96SZ6 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDK5RAP1Q96SZ6 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDK5RAP1Q96SZ6 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDK5RAP1Q96SZ6 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDK5RAP1Q96SZ6 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.14■□□□□ 0.34
CDK5RAP1Q96SZ6 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
CDK5RAP1Q96SZ6 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
CDK5RAP1Q96SZ6 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDK5RAP1Q96SZ6 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
CDK5RAP1Q96SZ6 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CDK5RAP1Q96SZ6 HLA-A-202ENST00000376806 1854 ntBASIC17.14■□□□□ 0.33
CDK5RAP1Q96SZ6 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.14■□□□□ 0.33
CDK5RAP1Q96SZ6 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDK5RAP1Q96SZ6 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDK5RAP1Q96SZ6 GGT3P-204ENST00000453783 1664 ntBASIC17.14■□□□□ 0.33
CDK5RAP1Q96SZ6 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDK5RAP1Q96SZ6 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CDK5RAP1Q96SZ6 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CDK5RAP1Q96SZ6 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms