Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NEK1Q96PY6 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NEK1Q96PY6 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NEK1Q96PY6 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NEK1Q96PY6 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NEK1Q96PY6 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.62■□□□□ 0.73
NEK1Q96PY6 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NEK1Q96PY6 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.62■□□□□ 0.73
NEK1Q96PY6 AC140658.5-201ENST00000438532 169 ntBASIC19.62■□□□□ 0.73
NEK1Q96PY6 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NEK1Q96PY6 AL591424.1-201ENST00000442569 1213 ntBASIC19.62■□□□□ 0.73
NEK1Q96PY6 KRT18P3-201ENST00000451602 1288 ntBASIC19.62■□□□□ 0.73
NEK1Q96PY6 POU5F1P6-201ENST00000466990 990 ntBASIC19.62■□□□□ 0.73
NEK1Q96PY6 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.62■□□□□ 0.73
NEK1Q96PY6 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.62■□□□□ 0.73
NEK1Q96PY6 AC109635.5-201ENST00000533593 962 ntBASIC19.62■□□□□ 0.73
NEK1Q96PY6 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
NEK1Q96PY6 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.62■□□□□ 0.73
NEK1Q96PY6 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.62■□□□□ 0.73
NEK1Q96PY6 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
NEK1Q96PY6 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.62■□□□□ 0.73
NEK1Q96PY6 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.62■□□□□ 0.73
NEK1Q96PY6 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
NEK1Q96PY6 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
NEK1Q96PY6 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NEK1Q96PY6 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NEK1Q96PY6 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NEK1Q96PY6 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.62■□□□□ 0.73
NEK1Q96PY6 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NEK1Q96PY6 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NEK1Q96PY6 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NEK1Q96PY6 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NEK1Q96PY6 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NEK1Q96PY6 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NEK1Q96PY6 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEK1Q96PY6 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEK1Q96PY6 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
NEK1Q96PY6 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEK1Q96PY6 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NEK1Q96PY6 AC026691.1-201ENST00000602502 2017 ntBASIC19.61■□□□□ 0.73
NEK1Q96PY6 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEK1Q96PY6 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
NEK1Q96PY6 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEK1Q96PY6 AL391005.1-201ENST00000623953 2435 ntBASIC19.61■□□□□ 0.73
NEK1Q96PY6 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEK1Q96PY6 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEK1Q96PY6 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEK1Q96PY6 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
NEK1Q96PY6 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.61■□□□□ 0.73
NEK1Q96PY6 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.61■□□□□ 0.73
NEK1Q96PY6 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.61■□□□□ 0.73
NEK1Q96PY6 MED15P5-201ENST00000423150 992 ntBASIC19.61■□□□□ 0.73
NEK1Q96PY6 AC092474.2-201ENST00000424288 719 ntBASIC19.61■□□□□ 0.73
NEK1Q96PY6 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.61■□□□□ 0.73
NEK1Q96PY6 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NEK1Q96PY6 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NEK1Q96PY6 RNA5SP416-201ENST00000516838 111 ntBASIC19.61■□□□□ 0.73
NEK1Q96PY6 FAM197Y3-203ENST00000618346 717 ntBASIC19.61■□□□□ 0.73
NEK1Q96PY6 AL513190.1-201ENST00000621254 727 ntBASIC19.61■□□□□ 0.73
NEK1Q96PY6 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC19.61■□□□□ 0.73
NEK1Q96PY6 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
NEK1Q96PY6 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.61■□□□□ 0.73
NEK1Q96PY6 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.61■□□□□ 0.73
NEK1Q96PY6 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEK1Q96PY6 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEK1Q96PY6 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEK1Q96PY6 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEK1Q96PY6 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEK1Q96PY6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
NEK1Q96PY6 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
NEK1Q96PY6 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
NEK1Q96PY6 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.61■□□□□ 0.73
NEK1Q96PY6 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
NEK1Q96PY6 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEK1Q96PY6 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.6■□□□□ 0.73
NEK1Q96PY6 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEK1Q96PY6 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NEK1Q96PY6 BANP-204ENST00000393208 2283 ntTSL 2 BASIC19.6■□□□□ 0.73
NEK1Q96PY6 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NEK1Q96PY6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEK1Q96PY6 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEK1Q96PY6 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
NEK1Q96PY6 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
NEK1Q96PY6 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEK1Q96PY6 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEK1Q96PY6 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEK1Q96PY6 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEK1Q96PY6 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEK1Q96PY6 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.6■□□□□ 0.73
NEK1Q96PY6 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEK1Q96PY6 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEK1Q96PY6 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEK1Q96PY6 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.6■□□□□ 0.73
NEK1Q96PY6 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
NEK1Q96PY6 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.6■□□□□ 0.73
NEK1Q96PY6 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.6■□□□□ 0.73
NEK1Q96PY6 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
NEK1Q96PY6 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.6■□□□□ 0.73
NEK1Q96PY6 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.6■□□□□ 0.73
NEK1Q96PY6 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms