Protein–RNA interactions for Protein: Q96L91

EP400, E1A-binding protein p400, humanhuman

Predictions only

Length 3,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EP400Q96L91 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
EP400Q96L91 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
EP400Q96L91 AC138028.4-201ENST00000564984 1845 ntBASIC21.07■□□□□ 0.96
EP400Q96L91 AC079336.7-201ENST00000623428 1078 ntBASIC21.07■□□□□ 0.96
EP400Q96L91 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC21.07■□□□□ 0.96
EP400Q96L91 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC21.07■□□□□ 0.96
EP400Q96L91 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
EP400Q96L91 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
EP400Q96L91 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
EP400Q96L91 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC21.06■□□□□ 0.96
EP400Q96L91 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC21.06■□□□□ 0.96
EP400Q96L91 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
EP400Q96L91 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC21.06■□□□□ 0.96
EP400Q96L91 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
EP400Q96L91 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC21.06■□□□□ 0.96
EP400Q96L91 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
EP400Q96L91 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC21.06■□□□□ 0.96
EP400Q96L91 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC21.06■□□□□ 0.96
EP400Q96L91 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
EP400Q96L91 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
EP400Q96L91 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EP400Q96L91 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
EP400Q96L91 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
EP400Q96L91 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC21.06■□□□□ 0.96
EP400Q96L91 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC21.06■□□□□ 0.96
EP400Q96L91 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC21.06■□□□□ 0.96
EP400Q96L91 FGFR3P5-201ENST00000564496 886 ntBASIC21.06■□□□□ 0.96
EP400Q96L91 AC093503.3-201ENST00000624917 2352 ntBASIC21.06■□□□□ 0.96
EP400Q96L91 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.06■□□□□ 0.96
EP400Q96L91 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EP400Q96L91 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
EP400Q96L91 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EP400Q96L91 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
EP400Q96L91 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EP400Q96L91 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
EP400Q96L91 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EP400Q96L91 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
EP400Q96L91 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC21.05■□□□□ 0.96
EP400Q96L91 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EP400Q96L91 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC21.05■□□□□ 0.96
EP400Q96L91 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC21.05■□□□□ 0.96
EP400Q96L91 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC21.05■□□□□ 0.96
EP400Q96L91 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.05■□□□□ 0.96
EP400Q96L91 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EP400Q96L91 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC21.05■□□□□ 0.96
EP400Q96L91 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.05■□□□□ 0.96
EP400Q96L91 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EP400Q96L91 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
EP400Q96L91 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.05■□□□□ 0.96
EP400Q96L91 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.05■□□□□ 0.96
EP400Q96L91 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EP400Q96L91 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
EP400Q96L91 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
EP400Q96L91 AC245884.6-201ENST00000515672 1067 ntBASIC21.05■□□□□ 0.96
EP400Q96L91 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
EP400Q96L91 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
EP400Q96L91 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
EP400Q96L91 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EP400Q96L91 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EP400Q96L91 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
EP400Q96L91 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
EP400Q96L91 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC21.05■□□□□ 0.96
EP400Q96L91 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
EP400Q96L91 VMO1-203ENST00000416307 712 ntTSL 2 BASIC21.05■□□□□ 0.96
EP400Q96L91 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.05■□□□□ 0.96
EP400Q96L91 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC21.05■□□□□ 0.96
EP400Q96L91 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
EP400Q96L91 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC21.04■□□□□ 0.96
EP400Q96L91 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
EP400Q96L91 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC21.04■□□□□ 0.96
EP400Q96L91 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
EP400Q96L91 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EP400Q96L91 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
EP400Q96L91 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
EP400Q96L91 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EP400Q96L91 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC21.04■□□□□ 0.96
EP400Q96L91 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
EP400Q96L91 NKAIN1P1-201ENST00000435754 582 ntBASIC21.04■□□□□ 0.96
EP400Q96L91 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC21.04■□□□□ 0.96
EP400Q96L91 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC21.04■□□□□ 0.96
EP400Q96L91 AC104982.3-201ENST00000581995 514 ntBASIC21.04■□□□□ 0.96
EP400Q96L91 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
EP400Q96L91 FST-202ENST00000396947 2538 ntTSL 5 BASIC21.04■□□□□ 0.96
EP400Q96L91 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
EP400Q96L91 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.04■□□□□ 0.96
EP400Q96L91 AC093525.9-201ENST00000624961 1746 ntBASIC21.04■□□□□ 0.96
EP400Q96L91 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EP400Q96L91 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EP400Q96L91 SDCCAG3P2-201ENST00000326105 1023 ntBASIC21.04■□□□□ 0.96
EP400Q96L91 AHCYP2-201ENST00000430630 1300 ntBASIC21.04■□□□□ 0.96
EP400Q96L91 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC21.04■□□□□ 0.96
EP400Q96L91 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
EP400Q96L91 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EP400Q96L91 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC21.03■□□□□ 0.96
EP400Q96L91 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC21.03■□□□□ 0.96
EP400Q96L91 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC21.03■□□□□ 0.96
EP400Q96L91 MIR3907-201ENST00000579424 151 ntBASIC21.03■□□□□ 0.96
EP400Q96L91 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
EP400Q96L91 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EP400Q96L91 AL451050.2-201ENST00000606967 682 ntBASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms