Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AP001889.1-201ENST00000525414 633 ntBASIC17.86■□□□□ 0.45
LRCH3Q96II8 SLC25A47P1-201ENST00000531577 414 ntBASIC17.86■□□□□ 0.45
LRCH3Q96II8 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.86■□□□□ 0.45
LRCH3Q96II8 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC17.86■□□□□ 0.45
LRCH3Q96II8 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.86■□□□□ 0.45
LRCH3Q96II8 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.86■□□□□ 0.45
LRCH3Q96II8 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LRCH3Q96II8 AC004461.2-201ENST00000629517 803 ntBASIC17.86■□□□□ 0.45
LRCH3Q96II8 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH3Q96II8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH3Q96II8 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH3Q96II8 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH3Q96II8 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH3Q96II8 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LRCH3Q96II8 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH3Q96II8 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH3Q96II8 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LRCH3Q96II8 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRCH3Q96II8 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.85■□□□□ 0.45
LRCH3Q96II8 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRCH3Q96II8 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRCH3Q96II8 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRCH3Q96II8 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.85■□□□□ 0.45
LRCH3Q96II8 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRCH3Q96II8 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRCH3Q96II8 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRCH3Q96II8 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
LRCH3Q96II8 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRCH3Q96II8 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRCH3Q96II8 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRCH3Q96II8 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
LRCH3Q96II8 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.85■□□□□ 0.45
LRCH3Q96II8 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.85■□□□□ 0.45
LRCH3Q96II8 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.85■□□□□ 0.45
LRCH3Q96II8 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
LRCH3Q96II8 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.85■□□□□ 0.45
LRCH3Q96II8 CALR4P-201ENST00000431943 946 ntBASIC17.85■□□□□ 0.45
LRCH3Q96II8 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRCH3Q96II8 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.85■□□□□ 0.45
LRCH3Q96II8 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
LRCH3Q96II8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.85■□□□□ 0.45
LRCH3Q96II8 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.85■□□□□ 0.45
LRCH3Q96II8 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.85■□□□□ 0.45
LRCH3Q96II8 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
LRCH3Q96II8 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRCH3Q96II8 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.85■□□□□ 0.45
LRCH3Q96II8 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.85■□□□□ 0.45
LRCH3Q96II8 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.85■□□□□ 0.45
LRCH3Q96II8 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.85■□□□□ 0.45
LRCH3Q96II8 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
LRCH3Q96II8 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.85■□□□□ 0.45
LRCH3Q96II8 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.85■□□□□ 0.45
LRCH3Q96II8 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.85■□□□□ 0.45
LRCH3Q96II8 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.85■□□□□ 0.45
LRCH3Q96II8 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.85■□□□□ 0.45
LRCH3Q96II8 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.85■□□□□ 0.45
LRCH3Q96II8 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.85■□□□□ 0.45
LRCH3Q96II8 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
LRCH3Q96II8 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRCH3Q96II8 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
LRCH3Q96II8 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRCH3Q96II8 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRCH3Q96II8 AC139713.2-201ENST00000641328 2723 ntBASIC17.85■□□□□ 0.45
LRCH3Q96II8 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.85■□□□□ 0.45
LRCH3Q96II8 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
LRCH3Q96II8 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRCH3Q96II8 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
LRCH3Q96II8 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
LRCH3Q96II8 AC134043.2-201ENST00000624206 2238 ntBASIC17.84■□□□□ 0.45
LRCH3Q96II8 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRCH3Q96II8 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRCH3Q96II8 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRCH3Q96II8 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.84■□□□□ 0.45
LRCH3Q96II8 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRCH3Q96II8 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.84■□□□□ 0.45
LRCH3Q96II8 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
LRCH3Q96II8 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
LRCH3Q96II8 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
LRCH3Q96II8 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.84■□□□□ 0.45
LRCH3Q96II8 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.84■□□□□ 0.45
LRCH3Q96II8 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.84■□□□□ 0.45
LRCH3Q96II8 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.84■□□□□ 0.45
LRCH3Q96II8 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.84■□□□□ 0.45
LRCH3Q96II8 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.84■□□□□ 0.45
LRCH3Q96II8 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.84■□□□□ 0.45
LRCH3Q96II8 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.84■□□□□ 0.45
LRCH3Q96II8 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
LRCH3Q96II8 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.84■□□□□ 0.45
LRCH3Q96II8 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRCH3Q96II8 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.84■□□□□ 0.45
LRCH3Q96II8 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.84■□□□□ 0.45
LRCH3Q96II8 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRCH3Q96II8 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRCH3Q96II8 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRCH3Q96II8 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRCH3Q96II8 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
LRCH3Q96II8 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRCH3Q96II8 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRCH3Q96II8 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRCH3Q96II8 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms