Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.19■□□□□ 0.18
PDLIM5Q96HC4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDLIM5Q96HC4 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDLIM5Q96HC4 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PDLIM5Q96HC4 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDLIM5Q96HC4 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.19■□□□□ 0.18
PDLIM5Q96HC4 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.19■□□□□ 0.18
PDLIM5Q96HC4 IL9RP2-201ENST00000423948 1312 ntBASIC16.19■□□□□ 0.18
PDLIM5Q96HC4 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.19■□□□□ 0.18
PDLIM5Q96HC4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDLIM5Q96HC4 PCDHA1-201ENST00000378133 2726 ntBASIC16.18■□□□□ 0.18
PDLIM5Q96HC4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PDLIM5Q96HC4 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDLIM5Q96HC4 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDLIM5Q96HC4 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDLIM5Q96HC4 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDLIM5Q96HC4 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.18■□□□□ 0.18
PDLIM5Q96HC4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDLIM5Q96HC4 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
PDLIM5Q96HC4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDLIM5Q96HC4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDLIM5Q96HC4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDLIM5Q96HC4 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDLIM5Q96HC4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDLIM5Q96HC4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PDLIM5Q96HC4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.18■□□□□ 0.18
PDLIM5Q96HC4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
PDLIM5Q96HC4 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.18■□□□□ 0.18
PDLIM5Q96HC4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.18■□□□□ 0.18
PDLIM5Q96HC4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PDLIM5Q96HC4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDLIM5Q96HC4 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.18■□□□□ 0.18
PDLIM5Q96HC4 AC004877.2-201ENST00000623941 599 ntBASIC16.18■□□□□ 0.18
PDLIM5Q96HC4 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.18■□□□□ 0.18
PDLIM5Q96HC4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PDLIM5Q96HC4 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.18■□□□□ 0.18
PDLIM5Q96HC4 AC025580.3-201ENST00000617932 1424 ntBASIC16.18■□□□□ 0.18
PDLIM5Q96HC4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDLIM5Q96HC4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.18■□□□□ 0.18
PDLIM5Q96HC4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PDLIM5Q96HC4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 U82695.1-201ENST00000635752 1889 ntBASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 KRT18P2-201ENST00000447938 1258 ntBASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 KRT19P2-202ENST00000557173 1012 ntBASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 BX640515.1-201ENST00000617215 977 ntBASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 AC079328.2-201ENST00000561241 3354 ntBASIC16.17■□□□□ 0.18
PDLIM5Q96HC4 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 AC092919.2-201ENST00000623631 1645 ntBASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 AL365203.3-201ENST00000609742 2057 ntBASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms