Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
IFT43Q96FT9 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.16■□□□□ 0.34
IFT43Q96FT9 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.16■□□□□ 0.34
IFT43Q96FT9 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IFT43Q96FT9 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.16■□□□□ 0.34
IFT43Q96FT9 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
IFT43Q96FT9 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
IFT43Q96FT9 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.15■□□□□ 0.34
IFT43Q96FT9 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IFT43Q96FT9 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IFT43Q96FT9 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IFT43Q96FT9 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.15■□□□□ 0.34
IFT43Q96FT9 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
IFT43Q96FT9 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IFT43Q96FT9 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IFT43Q96FT9 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
IFT43Q96FT9 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IFT43Q96FT9 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
IFT43Q96FT9 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.15■□□□□ 0.34
IFT43Q96FT9 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
IFT43Q96FT9 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
IFT43Q96FT9 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.15■□□□□ 0.34
IFT43Q96FT9 AC108073.2-201ENST00000464002 357 ntBASIC17.15■□□□□ 0.34
IFT43Q96FT9 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.15■□□□□ 0.34
IFT43Q96FT9 DUX4L17-201ENST00000557360 1267 ntBASIC17.15■□□□□ 0.34
IFT43Q96FT9 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.15■□□□□ 0.34
IFT43Q96FT9 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
IFT43Q96FT9 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IFT43Q96FT9 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
IFT43Q96FT9 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
IFT43Q96FT9 AC068418.2-201ENST00000577309 3703 ntBASIC17.15■□□□□ 0.34
IFT43Q96FT9 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IFT43Q96FT9 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IFT43Q96FT9 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.15■□□□□ 0.34
IFT43Q96FT9 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.15■□□□□ 0.34
IFT43Q96FT9 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IFT43Q96FT9 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.15■□□□□ 0.34
IFT43Q96FT9 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IFT43Q96FT9 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IFT43Q96FT9 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IFT43Q96FT9 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IFT43Q96FT9 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IFT43Q96FT9 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
IFT43Q96FT9 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
IFT43Q96FT9 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IFT43Q96FT9 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.14■□□□□ 0.33
IFT43Q96FT9 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IFT43Q96FT9 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IFT43Q96FT9 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.14■□□□□ 0.33
IFT43Q96FT9 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IFT43Q96FT9 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
IFT43Q96FT9 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IFT43Q96FT9 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
IFT43Q96FT9 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IFT43Q96FT9 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IFT43Q96FT9 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
IFT43Q96FT9 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IFT43Q96FT9 AC004967.1-201ENST00000453589 447 ntBASIC17.14■□□□□ 0.33
IFT43Q96FT9 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
IFT43Q96FT9 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
IFT43Q96FT9 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.14■□□□□ 0.33
IFT43Q96FT9 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IFT43Q96FT9 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.14■□□□□ 0.33
IFT43Q96FT9 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IFT43Q96FT9 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IFT43Q96FT9 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
IFT43Q96FT9 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IFT43Q96FT9 AL136379.1-201ENST00000623471 2642 ntBASIC17.14■□□□□ 0.33
IFT43Q96FT9 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
IFT43Q96FT9 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IFT43Q96FT9 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IFT43Q96FT9 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.13■□□□□ 0.33
IFT43Q96FT9 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.13■□□□□ 0.33
IFT43Q96FT9 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
IFT43Q96FT9 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IFT43Q96FT9 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
IFT43Q96FT9 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
IFT43Q96FT9 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IFT43Q96FT9 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
IFT43Q96FT9 AC026691.1-201ENST00000602502 2017 ntBASIC17.13■□□□□ 0.33
IFT43Q96FT9 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
IFT43Q96FT9 MRPL20P1-201ENST00000400819 433 ntBASIC17.13■□□□□ 0.33
IFT43Q96FT9 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.13■□□□□ 0.33
IFT43Q96FT9 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.13■□□□□ 0.33
IFT43Q96FT9 HCG4B-203ENST00000450128 991 ntBASIC17.13■□□□□ 0.33
IFT43Q96FT9 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.13■□□□□ 0.33
IFT43Q96FT9 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.13■□□□□ 0.33
IFT43Q96FT9 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IFT43Q96FT9 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.13■□□□□ 0.33
IFT43Q96FT9 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.13■□□□□ 0.33
IFT43Q96FT9 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.13■□□□□ 0.33
IFT43Q96FT9 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
IFT43Q96FT9 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.13■□□□□ 0.33
IFT43Q96FT9 AP001160.2-201ENST00000596071 487 ntBASIC17.13■□□□□ 0.33
IFT43Q96FT9 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IFT43Q96FT9 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
IFT43Q96FT9 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
IFT43Q96FT9 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
IFT43Q96FT9 TOP3BP1-201ENST00000420768 1380 ntBASIC17.13■□□□□ 0.33
IFT43Q96FT9 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms