Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
DDX11Q96FC9 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDX11Q96FC9 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
DDX11Q96FC9 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.71■□□□□ 0.75
DDX11Q96FC9 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDX11Q96FC9 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DDX11Q96FC9 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DDX11Q96FC9 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.71■□□□□ 0.75
DDX11Q96FC9 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
DDX11Q96FC9 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.71■□□□□ 0.75
DDX11Q96FC9 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.71■□□□□ 0.75
DDX11Q96FC9 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.71■□□□□ 0.75
DDX11Q96FC9 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.71■□□□□ 0.75
DDX11Q96FC9 AP002490.2-201ENST00000524791 560 ntBASIC19.71■□□□□ 0.75
DDX11Q96FC9 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.71■□□□□ 0.75
DDX11Q96FC9 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.71■□□□□ 0.75
DDX11Q96FC9 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.71■□□□□ 0.75
DDX11Q96FC9 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.71■□□□□ 0.75
DDX11Q96FC9 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDX11Q96FC9 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
DDX11Q96FC9 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
DDX11Q96FC9 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
DDX11Q96FC9 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
DDX11Q96FC9 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
DDX11Q96FC9 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
DDX11Q96FC9 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
DDX11Q96FC9 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.71■□□□□ 0.75
DDX11Q96FC9 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DDX11Q96FC9 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DDX11Q96FC9 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DDX11Q96FC9 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX11Q96FC9 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
DDX11Q96FC9 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
DDX11Q96FC9 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX11Q96FC9 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
DDX11Q96FC9 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX11Q96FC9 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX11Q96FC9 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
DDX11Q96FC9 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX11Q96FC9 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX11Q96FC9 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DDX11Q96FC9 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX11Q96FC9 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX11Q96FC9 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX11Q96FC9 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.7■□□□□ 0.74
DDX11Q96FC9 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX11Q96FC9 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.7■□□□□ 0.74
DDX11Q96FC9 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX11Q96FC9 AC087163.2-201ENST00000457299 853 ntBASIC19.7■□□□□ 0.74
DDX11Q96FC9 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.7■□□□□ 0.74
DDX11Q96FC9 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
DDX11Q96FC9 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
DDX11Q96FC9 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
DDX11Q96FC9 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DDX11Q96FC9 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.7■□□□□ 0.74
DDX11Q96FC9 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC19.7■□□□□ 0.74
DDX11Q96FC9 AC008894.3-201ENST00000624324 3103 ntBASIC19.7■□□□□ 0.74
DDX11Q96FC9 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX11Q96FC9 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DDX11Q96FC9 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX11Q96FC9 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
DDX11Q96FC9 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC19.7■□□□□ 0.74
DDX11Q96FC9 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
DDX11Q96FC9 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX11Q96FC9 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
DDX11Q96FC9 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DDX11Q96FC9 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
DDX11Q96FC9 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.7■□□□□ 0.74
DDX11Q96FC9 AC005052.1-201ENST00000625181 2492 ntBASIC19.69■□□□□ 0.74
DDX11Q96FC9 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDX11Q96FC9 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDX11Q96FC9 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDX11Q96FC9 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
DDX11Q96FC9 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DDX11Q96FC9 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDX11Q96FC9 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.69■□□□□ 0.74
DDX11Q96FC9 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DDX11Q96FC9 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDX11Q96FC9 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DDX11Q96FC9 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDX11Q96FC9 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.69■□□□□ 0.74
DDX11Q96FC9 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.69■□□□□ 0.74
DDX11Q96FC9 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
DDX11Q96FC9 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.69■□□□□ 0.74
DDX11Q96FC9 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.69■□□□□ 0.74
DDX11Q96FC9 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DDX11Q96FC9 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.69■□□□□ 0.74
DDX11Q96FC9 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDX11Q96FC9 AC091812.2-201ENST00000619081 385 ntBASIC19.69■□□□□ 0.74
DDX11Q96FC9 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.69■□□□□ 0.74
DDX11Q96FC9 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDX11Q96FC9 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDX11Q96FC9 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
DDX11Q96FC9 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.69■□□□□ 0.74
DDX11Q96FC9 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
DDX11Q96FC9 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDX11Q96FC9 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.69■□□□□ 0.74
DDX11Q96FC9 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDX11Q96FC9 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
DDX11Q96FC9 LINC00895-201ENST00000629028 1637 ntBASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms