Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM11Q96F44 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM11Q96F44 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM11Q96F44 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM11Q96F44 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.56■□□□□ 0.4
TRIM11Q96F44 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TRIM11Q96F44 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM11Q96F44 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM11Q96F44 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM11Q96F44 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM11Q96F44 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM11Q96F44 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.55■□□□□ 0.4
TRIM11Q96F44 AL596087.1-201ENST00000400979 1969 ntBASIC17.55■□□□□ 0.4
TRIM11Q96F44 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM11Q96F44 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM11Q96F44 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM11Q96F44 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM11Q96F44 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TRIM11Q96F44 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM11Q96F44 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM11Q96F44 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM11Q96F44 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM11Q96F44 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM11Q96F44 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM11Q96F44 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM11Q96F44 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM11Q96F44 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRIM11Q96F44 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.55■□□□□ 0.4
TRIM11Q96F44 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM11Q96F44 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.55■□□□□ 0.4
TRIM11Q96F44 AL160237.2-201ENST00000556165 472 ntBASIC17.55■□□□□ 0.4
TRIM11Q96F44 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM11Q96F44 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM11Q96F44 MIR7706-201ENST00000613747 67 ntBASIC17.55■□□□□ 0.4
TRIM11Q96F44 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM11Q96F44 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM11Q96F44 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM11Q96F44 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM11Q96F44 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM11Q96F44 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TRIM11Q96F44 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
TRIM11Q96F44 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM11Q96F44 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM11Q96F44 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRIM11Q96F44 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM11Q96F44 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM11Q96F44 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM11Q96F44 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
TRIM11Q96F44 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM11Q96F44 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM11Q96F44 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM11Q96F44 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM11Q96F44 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM11Q96F44 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM11Q96F44 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM11Q96F44 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM11Q96F44 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM11Q96F44 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM11Q96F44 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM11Q96F44 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM11Q96F44 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRIM11Q96F44 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM11Q96F44 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM11Q96F44 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM11Q96F44 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM11Q96F44 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM11Q96F44 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.54■□□□□ 0.4
TRIM11Q96F44 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
TRIM11Q96F44 AL031432.2-201ENST00000566714 459 ntBASIC17.54■□□□□ 0.4
TRIM11Q96F44 AL928711.1-201ENST00000570165 459 ntBASIC17.54■□□□□ 0.4
TRIM11Q96F44 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM11Q96F44 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM11Q96F44 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TRIM11Q96F44 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM11Q96F44 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM11Q96F44 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRIM11Q96F44 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM11Q96F44 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM11Q96F44 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM11Q96F44 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM11Q96F44 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM11Q96F44 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM11Q96F44 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM11Q96F44 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM11Q96F44 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRIM11Q96F44 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM11Q96F44 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.53■□□□□ 0.4
TRIM11Q96F44 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM11Q96F44 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM11Q96F44 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM11Q96F44 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM11Q96F44 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
TRIM11Q96F44 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.53■□□□□ 0.4
TRIM11Q96F44 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM11Q96F44 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM11Q96F44 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TRIM11Q96F44 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.53■□□□□ 0.4
TRIM11Q96F44 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM11Q96F44 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM11Q96F44 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms