Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.89■□□□□ 0.29
RTP4Q96DX8 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.88■□□□□ 0.29
RTP4Q96DX8 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTP4Q96DX8 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RTP4Q96DX8 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
RTP4Q96DX8 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTP4Q96DX8 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTP4Q96DX8 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
RTP4Q96DX8 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTP4Q96DX8 AC005622.1-201ENST00000636801 1703 ntBASIC16.88■□□□□ 0.29
RTP4Q96DX8 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.88■□□□□ 0.29
RTP4Q96DX8 AL162727.3-201ENST00000635661 2787 ntBASIC16.88■□□□□ 0.29
RTP4Q96DX8 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTP4Q96DX8 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RTP4Q96DX8 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.88■□□□□ 0.29
RTP4Q96DX8 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.88■□□□□ 0.29
RTP4Q96DX8 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
RTP4Q96DX8 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.88■□□□□ 0.29
RTP4Q96DX8 HCG4B-203ENST00000450128 991 ntBASIC16.88■□□□□ 0.29
RTP4Q96DX8 UNC93B6-202ENST00000528242 690 ntBASIC16.88■□□□□ 0.29
RTP4Q96DX8 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
RTP4Q96DX8 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
RTP4Q96DX8 AC034105.1-201ENST00000563488 319 ntBASIC16.88■□□□□ 0.29
RTP4Q96DX8 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.88■□□□□ 0.29
RTP4Q96DX8 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.88■□□□□ 0.29
RTP4Q96DX8 AC027601.4-201ENST00000611259 610 ntBASIC16.88■□□□□ 0.29
RTP4Q96DX8 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTP4Q96DX8 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
RTP4Q96DX8 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RTP4Q96DX8 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTP4Q96DX8 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTP4Q96DX8 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RTP4Q96DX8 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTP4Q96DX8 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
RTP4Q96DX8 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTP4Q96DX8 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
RTP4Q96DX8 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RTP4Q96DX8 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.88■□□□□ 0.29
RTP4Q96DX8 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTP4Q96DX8 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTP4Q96DX8 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTP4Q96DX8 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTP4Q96DX8 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTP4Q96DX8 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTP4Q96DX8 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTP4Q96DX8 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RTP4Q96DX8 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTP4Q96DX8 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.87■□□□□ 0.29
RTP4Q96DX8 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTP4Q96DX8 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTP4Q96DX8 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.87■□□□□ 0.29
RTP4Q96DX8 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.87■□□□□ 0.29
RTP4Q96DX8 RNA5SP415-201ENST00000517246 115 ntBASIC16.87■□□□□ 0.29
RTP4Q96DX8 PGAM5P1-201ENST00000518923 814 ntBASIC16.87■□□□□ 0.29
RTP4Q96DX8 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
RTP4Q96DX8 AC109635.5-201ENST00000533593 962 ntBASIC16.87■□□□□ 0.29
RTP4Q96DX8 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.87■□□□□ 0.29
RTP4Q96DX8 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RTP4Q96DX8 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.87■□□□□ 0.29
RTP4Q96DX8 AC140113.2-201ENST00000604370 208 ntBASIC16.87■□□□□ 0.29
RTP4Q96DX8 Z83851.2-201ENST00000609564 659 ntBASIC16.87■□□□□ 0.29
RTP4Q96DX8 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
RTP4Q96DX8 FAM197Y3-203ENST00000618346 717 ntBASIC16.87■□□□□ 0.29
RTP4Q96DX8 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RTP4Q96DX8 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTP4Q96DX8 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.87■□□□□ 0.29
RTP4Q96DX8 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTP4Q96DX8 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTP4Q96DX8 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTP4Q96DX8 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTP4Q96DX8 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
RTP4Q96DX8 AC008894.3-201ENST00000624324 3103 ntBASIC16.87■□□□□ 0.29
RTP4Q96DX8 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
RTP4Q96DX8 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RTP4Q96DX8 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTP4Q96DX8 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RTP4Q96DX8 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTP4Q96DX8 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.87■□□□□ 0.29
RTP4Q96DX8 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.86■□□□□ 0.29
RTP4Q96DX8 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.86■□□□□ 0.29
RTP4Q96DX8 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.86■□□□□ 0.29
RTP4Q96DX8 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTP4Q96DX8 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTP4Q96DX8 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RTP4Q96DX8 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RTP4Q96DX8 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTP4Q96DX8 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTP4Q96DX8 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTP4Q96DX8 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTP4Q96DX8 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTP4Q96DX8 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RTP4Q96DX8 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTP4Q96DX8 MIR648-201ENST00000385046 94 ntBASIC16.86■□□□□ 0.29
RTP4Q96DX8 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.86■□□□□ 0.29
RTP4Q96DX8 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RTP4Q96DX8 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.86■□□□□ 0.29
RTP4Q96DX8 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.86■□□□□ 0.29
RTP4Q96DX8 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RTP4Q96DX8 MED15P5-201ENST00000423150 992 ntBASIC16.86■□□□□ 0.29
RTP4Q96DX8 RHOQP3-201ENST00000437982 621 ntBASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms