Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AL022328.1-201ENST00000610050 478 ntBASIC17.77■□□□□ 0.44
TRIM43Q96BQ3 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.77■□□□□ 0.44
TRIM43Q96BQ3 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.77■□□□□ 0.44
TRIM43Q96BQ3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM43Q96BQ3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM43Q96BQ3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
TRIM43Q96BQ3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM43Q96BQ3 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM43Q96BQ3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.77■□□□□ 0.43
TRIM43Q96BQ3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.77■□□□□ 0.43
TRIM43Q96BQ3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
TRIM43Q96BQ3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM43Q96BQ3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM43Q96BQ3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM43Q96BQ3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM43Q96BQ3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM43Q96BQ3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM43Q96BQ3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM43Q96BQ3 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM43Q96BQ3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM43Q96BQ3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM43Q96BQ3 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.76■□□□□ 0.43
TRIM43Q96BQ3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM43Q96BQ3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM43Q96BQ3 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM43Q96BQ3 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM43Q96BQ3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.76■□□□□ 0.43
TRIM43Q96BQ3 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM43Q96BQ3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TRIM43Q96BQ3 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM43Q96BQ3 FAM21FP-201ENST00000426241 1131 ntBASIC17.76■□□□□ 0.43
TRIM43Q96BQ3 BCRP2-202ENST00000447763 634 ntBASIC17.76■□□□□ 0.43
TRIM43Q96BQ3 BCRP6-201ENST00000510112 632 ntBASIC17.76■□□□□ 0.43
TRIM43Q96BQ3 BCRP7-201ENST00000511549 544 ntBASIC17.76■□□□□ 0.43
TRIM43Q96BQ3 ZNF767P-206ENST00000513792 565 ntBASIC17.76■□□□□ 0.43
TRIM43Q96BQ3 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM43Q96BQ3 TDH-203ENST00000531764 1110 ntBASIC17.76■□□□□ 0.43
TRIM43Q96BQ3 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM43Q96BQ3 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.76■□□□□ 0.43
TRIM43Q96BQ3 CU634019.7-201ENST00000624153 1185 ntBASIC17.76■□□□□ 0.43
TRIM43Q96BQ3 FP236241.2-201ENST00000624906 1185 ntBASIC17.76■□□□□ 0.43
TRIM43Q96BQ3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM43Q96BQ3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM43Q96BQ3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM43Q96BQ3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.76■□□□□ 0.43
TRIM43Q96BQ3 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM43Q96BQ3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TRIM43Q96BQ3 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM43Q96BQ3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TRIM43Q96BQ3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM43Q96BQ3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 RPL7P3-201ENST00000441388 714 ntBASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 AL391069.4-201ENST00000609583 481 ntBASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM43Q96BQ3 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM43Q96BQ3 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM43Q96BQ3 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TRIM43Q96BQ3 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM43Q96BQ3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM43Q96BQ3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM43Q96BQ3 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM43Q96BQ3 AL162726.2-201ENST00000438986 1017 ntBASIC17.74■□□□□ 0.43
TRIM43Q96BQ3 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TRIM43Q96BQ3 AC124947.2-201ENST00000547118 1133 ntBASIC17.74■□□□□ 0.43
TRIM43Q96BQ3 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms