Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 HLA-J-203ENST00000494367 1087 ntBASIC15.7■□□□□ 0.1
TM9SF4Q92544 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TM9SF4Q92544 AC026120.1-201ENST00000611536 926 ntBASIC15.7■□□□□ 0.1
TM9SF4Q92544 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TM9SF4Q92544 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
TM9SF4Q92544 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TM9SF4Q92544 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TM9SF4Q92544 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TM9SF4Q92544 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TM9SF4Q92544 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.7■□□□□ 0.1
TM9SF4Q92544 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TM9SF4Q92544 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TM9SF4Q92544 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TM9SF4Q92544 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TM9SF4Q92544 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TM9SF4Q92544 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TM9SF4Q92544 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
TM9SF4Q92544 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TM9SF4Q92544 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.69■□□□□ 0.1
TM9SF4Q92544 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
TM9SF4Q92544 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.69■□□□□ 0.1
TM9SF4Q92544 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TM9SF4Q92544 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TM9SF4Q92544 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.69■□□□□ 0.1
TM9SF4Q92544 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TM9SF4Q92544 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TM9SF4Q92544 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TM9SF4Q92544 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TM9SF4Q92544 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.69■□□□□ 0.1
TM9SF4Q92544 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.69■□□□□ 0.1
TM9SF4Q92544 TIMM8BP1-201ENST00000452384 211 ntBASIC15.69■□□□□ 0.1
TM9SF4Q92544 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TM9SF4Q92544 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.69■□□□□ 0.1
TM9SF4Q92544 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TM9SF4Q92544 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.69■□□□□ 0.1
TM9SF4Q92544 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.69■□□□□ 0.1
TM9SF4Q92544 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.69■□□□□ 0.1
TM9SF4Q92544 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.69■□□□□ 0.1
TM9SF4Q92544 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TM9SF4Q92544 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TM9SF4Q92544 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TM9SF4Q92544 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
TM9SF4Q92544 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TM9SF4Q92544 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TM9SF4Q92544 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TM9SF4Q92544 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TM9SF4Q92544 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TM9SF4Q92544 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TM9SF4Q92544 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TM9SF4Q92544 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TM9SF4Q92544 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TM9SF4Q92544 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TM9SF4Q92544 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TM9SF4Q92544 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.68■□□□□ 0.1
TM9SF4Q92544 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.68■□□□□ 0.1
TM9SF4Q92544 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.68■□□□□ 0.1
TM9SF4Q92544 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF4Q92544 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF4Q92544 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.68■□□□□ 0.1
TM9SF4Q92544 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TM9SF4Q92544 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
TM9SF4Q92544 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF4Q92544 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.68■□□□□ 0.1
TM9SF4Q92544 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF4Q92544 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.68■□□□□ 0.1
TM9SF4Q92544 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF4Q92544 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF4Q92544 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.68■□□□□ 0.1
TM9SF4Q92544 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF4Q92544 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.68■□□□□ 0.1
TM9SF4Q92544 SPDYE11-202ENST00000450699 704 ntBASIC15.68■□□□□ 0.1
TM9SF4Q92544 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.68■□□□□ 0.1
TM9SF4Q92544 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TM9SF4Q92544 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.68■□□□□ 0.1
TM9SF4Q92544 SPDYE9P-201ENST00000570642 692 ntBASIC15.68■□□□□ 0.1
TM9SF4Q92544 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.68■□□□□ 0.1
TM9SF4Q92544 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF4Q92544 SPDYE10P-202ENST00000612005 668 ntBASIC15.68■□□□□ 0.1
TM9SF4Q92544 SPDYE8P-202ENST00000612377 668 ntBASIC15.68■□□□□ 0.1
TM9SF4Q92544 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TM9SF4Q92544 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TM9SF4Q92544 LINC00628-201ENST00000628516 1289 ntBASIC15.68■□□□□ 0.1
TM9SF4Q92544 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.68■□□□□ 0.1
TM9SF4Q92544 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF4Q92544 RNF216P1-203ENST00000404404 2427 ntBASIC15.68■□□□□ 0.1
TM9SF4Q92544 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF4Q92544 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF4Q92544 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.68■□□□□ 0.1
TM9SF4Q92544 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
TM9SF4Q92544 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF4Q92544 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF4Q92544 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
TM9SF4Q92544 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.68■□□□□ 0.1
TM9SF4Q92544 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.68■□□□□ 0.1
TM9SF4Q92544 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.68■□□□□ 0.1
TM9SF4Q92544 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.68■□□□□ 0.1
TM9SF4Q92544 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.68■□□□□ 0.1
TM9SF4Q92544 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF4Q92544 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF4Q92544 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms