Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
DDX1Q92499 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.64■□□□□ 0.41
DDX1Q92499 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.64■□□□□ 0.41
DDX1Q92499 AL096865.1-201ENST00000606796 927 ntBASIC17.64■□□□□ 0.41
DDX1Q92499 AC020765.3-201ENST00000613051 740 ntBASIC17.64■□□□□ 0.41
DDX1Q92499 AC106028.4-201ENST00000614509 607 ntBASIC17.64■□□□□ 0.41
DDX1Q92499 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
DDX1Q92499 PCDHA1-201ENST00000378133 2726 ntBASIC17.64■□□□□ 0.41
DDX1Q92499 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDX1Q92499 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDX1Q92499 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DDX1Q92499 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
DDX1Q92499 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.64■□□□□ 0.41
DDX1Q92499 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DDX1Q92499 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDX1Q92499 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
DDX1Q92499 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDX1Q92499 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
DDX1Q92499 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDX1Q92499 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.64■□□□□ 0.41
DDX1Q92499 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DDX1Q92499 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
DDX1Q92499 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DDX1Q92499 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX1Q92499 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX1Q92499 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.63■□□□□ 0.41
DDX1Q92499 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DDX1Q92499 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX1Q92499 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DDX1Q92499 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX1Q92499 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX1Q92499 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
DDX1Q92499 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
DDX1Q92499 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX1Q92499 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX1Q92499 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.63■□□□□ 0.41
DDX1Q92499 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX1Q92499 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DDX1Q92499 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.63■□□□□ 0.41
DDX1Q92499 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.63■□□□□ 0.41
DDX1Q92499 POU5F1P6-201ENST00000466990 990 ntBASIC17.63■□□□□ 0.41
DDX1Q92499 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.63■□□□□ 0.41
DDX1Q92499 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.63■□□□□ 0.41
DDX1Q92499 AC018845.2-201ENST00000568326 409 ntBASIC17.63■□□□□ 0.41
DDX1Q92499 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.63■□□□□ 0.41
DDX1Q92499 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
DDX1Q92499 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
DDX1Q92499 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.63■□□□□ 0.41
DDX1Q92499 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.63■□□□□ 0.41
DDX1Q92499 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
DDX1Q92499 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
DDX1Q92499 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX1Q92499 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX1Q92499 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DDX1Q92499 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
DDX1Q92499 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX1Q92499 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DDX1Q92499 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DDX1Q92499 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
DDX1Q92499 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX1Q92499 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.62■□□□□ 0.41
DDX1Q92499 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.62■□□□□ 0.41
DDX1Q92499 AL596087.1-201ENST00000400979 1969 ntBASIC17.62■□□□□ 0.41
DDX1Q92499 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX1Q92499 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX1Q92499 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX1Q92499 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX1Q92499 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.62■□□□□ 0.41
DDX1Q92499 HCG11-201ENST00000411553 5696 ntBASIC17.62■□□□□ 0.41
DDX1Q92499 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX1Q92499 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX1Q92499 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX1Q92499 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.62■□□□□ 0.41
DDX1Q92499 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.62■□□□□ 0.41
DDX1Q92499 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.62■□□□□ 0.41
DDX1Q92499 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.62■□□□□ 0.41
DDX1Q92499 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
DDX1Q92499 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.62■□□□□ 0.41
DDX1Q92499 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.62■□□□□ 0.41
DDX1Q92499 AC023141.13-201ENST00000604991 943 ntBASIC17.62■□□□□ 0.41
DDX1Q92499 AC021097.1-201ENST00000607902 574 ntBASIC17.62■□□□□ 0.41
DDX1Q92499 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX1Q92499 AC004877.2-201ENST00000623941 599 ntBASIC17.62■□□□□ 0.41
DDX1Q92499 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX1Q92499 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DDX1Q92499 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX1Q92499 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX1Q92499 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
DDX1Q92499 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.62■□□□□ 0.41
DDX1Q92499 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.62■□□□□ 0.41
DDX1Q92499 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX1Q92499 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.62■□□□□ 0.41
DDX1Q92499 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX1Q92499 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DDX1Q92499 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DDX1Q92499 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DDX1Q92499 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.62■□□□□ 0.41
DDX1Q92499 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX1Q92499 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.61■□□□□ 0.41
DDX1Q92499 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms