Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB3IL1Q8TBN0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB3IL1Q8TBN0 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.63■□□□□ 0.25
RAB3IL1Q8TBN0 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB3IL1Q8TBN0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RAB3IL1Q8TBN0 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB3IL1Q8TBN0 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB3IL1Q8TBN0 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB3IL1Q8TBN0 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB3IL1Q8TBN0 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB3IL1Q8TBN0 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.63■□□□□ 0.25
RAB3IL1Q8TBN0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB3IL1Q8TBN0 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB3IL1Q8TBN0 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB3IL1Q8TBN0 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB3IL1Q8TBN0 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB3IL1Q8TBN0 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB3IL1Q8TBN0 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
RAB3IL1Q8TBN0 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 GGT4P-201ENST00000623672 1708 ntBASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 AC097376.2-205ENST00000610159 5334 ntBASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 SPDYE13P-201ENST00000445314 798 ntBASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 SIGLEC30P-201ENST00000455569 941 ntBASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3IL1Q8TBN0 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3IL1Q8TBN0 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3IL1Q8TBN0 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.61■□□□□ 0.25
RAB3IL1Q8TBN0 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3IL1Q8TBN0 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3IL1Q8TBN0 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3IL1Q8TBN0 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3IL1Q8TBN0 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3IL1Q8TBN0 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB3IL1Q8TBN0 AC006449.6-201ENST00000612330 2296 ntBASIC16.61■□□□□ 0.25
RAB3IL1Q8TBN0 AC092850.2-201ENST00000623821 2697 ntBASIC16.61■□□□□ 0.25
RAB3IL1Q8TBN0 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3IL1Q8TBN0 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
RAB3IL1Q8TBN0 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3IL1Q8TBN0 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB3IL1Q8TBN0 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3IL1Q8TBN0 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3IL1Q8TBN0 RNF152P1-201ENST00000397754 604 ntBASIC16.61■□□□□ 0.25
RAB3IL1Q8TBN0 TSPY22P-201ENST00000427496 604 ntBASIC16.61■□□□□ 0.25
RAB3IL1Q8TBN0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.61■□□□□ 0.25
RAB3IL1Q8TBN0 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.61■□□□□ 0.25
RAB3IL1Q8TBN0 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.61■□□□□ 0.25
RAB3IL1Q8TBN0 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.61■□□□□ 0.25
RAB3IL1Q8TBN0 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RAB3IL1Q8TBN0 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3IL1Q8TBN0 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.61■□□□□ 0.25
RAB3IL1Q8TBN0 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3IL1Q8TBN0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3IL1Q8TBN0 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
RAB3IL1Q8TBN0 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
RAB3IL1Q8TBN0 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3IL1Q8TBN0 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB3IL1Q8TBN0 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB3IL1Q8TBN0 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
RAB3IL1Q8TBN0 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3IL1Q8TBN0 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
RAB3IL1Q8TBN0 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3IL1Q8TBN0 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms