Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.2■□□□□ 0.66
NEDD1Q8NHV4 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.2■□□□□ 0.66
NEDD1Q8NHV4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD1Q8NHV4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.2■□□□□ 0.66
NEDD1Q8NHV4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD1Q8NHV4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.2■□□□□ 0.66
NEDD1Q8NHV4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
NEDD1Q8NHV4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD1Q8NHV4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD1Q8NHV4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
NEDD1Q8NHV4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.2■□□□□ 0.66
NEDD1Q8NHV4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD1Q8NHV4 AL353705.2-201ENST00000428243 662 ntBASIC19.2■□□□□ 0.66
NEDD1Q8NHV4 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.2■□□□□ 0.66
NEDD1Q8NHV4 BCRP1-201ENST00000444246 691 ntBASIC19.2■□□□□ 0.66
NEDD1Q8NHV4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.2■□□□□ 0.66
NEDD1Q8NHV4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.2■□□□□ 0.66
NEDD1Q8NHV4 AC024267.1-201ENST00000582320 895 ntBASIC19.2■□□□□ 0.66
NEDD1Q8NHV4 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.2■□□□□ 0.66
NEDD1Q8NHV4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.2■□□□□ 0.66
NEDD1Q8NHV4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD1Q8NHV4 AC011467.4-201ENST00000594891 528 ntBASIC19.2■□□□□ 0.66
NEDD1Q8NHV4 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.2■□□□□ 0.66
NEDD1Q8NHV4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.2■□□□□ 0.66
NEDD1Q8NHV4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.2■□□□□ 0.66
NEDD1Q8NHV4 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.2■□□□□ 0.66
NEDD1Q8NHV4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
NEDD1Q8NHV4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.2■□□□□ 0.66
NEDD1Q8NHV4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
NEDD1Q8NHV4 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD1Q8NHV4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD1Q8NHV4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD1Q8NHV4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.2■□□□□ 0.66
NEDD1Q8NHV4 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.2■□□□□ 0.66
NEDD1Q8NHV4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD1Q8NHV4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD1Q8NHV4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD1Q8NHV4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD1Q8NHV4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 POU5F1P6-201ENST00000466990 990 ntBASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 AC092171.3-201ENST00000610122 2651 ntBASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 AL035456.1-201ENST00000456064 1369 ntBASIC19.19■□□□□ 0.66
NEDD1Q8NHV4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEDD1Q8NHV4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.18■□□□□ 0.66
NEDD1Q8NHV4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
NEDD1Q8NHV4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.18■□□□□ 0.66
NEDD1Q8NHV4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.18■□□□□ 0.66
NEDD1Q8NHV4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.18■□□□□ 0.66
NEDD1Q8NHV4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.18■□□□□ 0.66
NEDD1Q8NHV4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEDD1Q8NHV4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.18■□□□□ 0.66
NEDD1Q8NHV4 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NEDD1Q8NHV4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEDD1Q8NHV4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.18■□□□□ 0.66
NEDD1Q8NHV4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.18■□□□□ 0.66
NEDD1Q8NHV4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.18■□□□□ 0.66
NEDD1Q8NHV4 AC093214.1-201ENST00000511688 1107 ntBASIC19.18■□□□□ 0.66
NEDD1Q8NHV4 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NEDD1Q8NHV4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.18■□□□□ 0.66
NEDD1Q8NHV4 AC105021.1-202ENST00000570572 669 ntBASIC19.18■□□□□ 0.66
NEDD1Q8NHV4 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.18■□□□□ 0.66
NEDD1Q8NHV4 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.18■□□□□ 0.66
NEDD1Q8NHV4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.18■□□□□ 0.66
NEDD1Q8NHV4 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms