Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.41□□□□□ -0.1
BEST4Q8NFU0 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
BEST4Q8NFU0 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.41□□□□□ -0.1
BEST4Q8NFU0 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.41□□□□□ -0.1
BEST4Q8NFU0 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BEST4Q8NFU0 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
BEST4Q8NFU0 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
BEST4Q8NFU0 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.41□□□□□ -0.1
BEST4Q8NFU0 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
BEST4Q8NFU0 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.41□□□□□ -0.1
BEST4Q8NFU0 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
BEST4Q8NFU0 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.41□□□□□ -0.1
BEST4Q8NFU0 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
BEST4Q8NFU0 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
BEST4Q8NFU0 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BEST4Q8NFU0 AC125634.1-201ENST00000438758 1403 ntBASIC14.41□□□□□ -0.1
BEST4Q8NFU0 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
BEST4Q8NFU0 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BEST4Q8NFU0 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.41□□□□□ -0.1
BEST4Q8NFU0 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BEST4Q8NFU0 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
BEST4Q8NFU0 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BEST4Q8NFU0 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
BEST4Q8NFU0 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
BEST4Q8NFU0 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.4□□□□□ -0.1
BEST4Q8NFU0 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
BEST4Q8NFU0 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BEST4Q8NFU0 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
BEST4Q8NFU0 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.4□□□□□ -0.1
BEST4Q8NFU0 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
BEST4Q8NFU0 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
BEST4Q8NFU0 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.4□□□□□ -0.1
BEST4Q8NFU0 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BEST4Q8NFU0 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BEST4Q8NFU0 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.4□□□□□ -0.1
BEST4Q8NFU0 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.4□□□□□ -0.1
BEST4Q8NFU0 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BEST4Q8NFU0 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.4□□□□□ -0.1
BEST4Q8NFU0 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.4□□□□□ -0.1
BEST4Q8NFU0 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
BEST4Q8NFU0 HBZP1-201ENST00000354915 429 ntBASIC14.4□□□□□ -0.1
BEST4Q8NFU0 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC14.4□□□□□ -0.1
BEST4Q8NFU0 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BEST4Q8NFU0 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
BEST4Q8NFU0 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.4□□□□□ -0.1
BEST4Q8NFU0 STK19B-204ENST00000512515 211 ntBASIC14.4□□□□□ -0.1
BEST4Q8NFU0 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14.4□□□□□ -0.1
BEST4Q8NFU0 AC010203.1-204ENST00000548782 407 ntBASIC14.4□□□□□ -0.1
BEST4Q8NFU0 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.4□□□□□ -0.1
BEST4Q8NFU0 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
BEST4Q8NFU0 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BEST4Q8NFU0 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
BEST4Q8NFU0 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.4□□□□□ -0.1
BEST4Q8NFU0 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.4□□□□□ -0.1
BEST4Q8NFU0 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
BEST4Q8NFU0 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
BEST4Q8NFU0 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BEST4Q8NFU0 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BEST4Q8NFU0 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
BEST4Q8NFU0 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
BEST4Q8NFU0 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
BEST4Q8NFU0 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
BEST4Q8NFU0 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.39□□□□□ -0.11
BEST4Q8NFU0 AC138035.3-201ENST00000622706 2791 ntBASIC14.39□□□□□ -0.11
BEST4Q8NFU0 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.39□□□□□ -0.11
BEST4Q8NFU0 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
BEST4Q8NFU0 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BEST4Q8NFU0 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BEST4Q8NFU0 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BEST4Q8NFU0 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BEST4Q8NFU0 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.39□□□□□ -0.11
BEST4Q8NFU0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.39□□□□□ -0.11
BEST4Q8NFU0 AC009336.1-201ENST00000608941 1553 ntBASIC14.39□□□□□ -0.11
BEST4Q8NFU0 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
BEST4Q8NFU0 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.39□□□□□ -0.11
BEST4Q8NFU0 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.39□□□□□ -0.11
BEST4Q8NFU0 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.39□□□□□ -0.11
BEST4Q8NFU0 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
BEST4Q8NFU0 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BEST4Q8NFU0 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BEST4Q8NFU0 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BEST4Q8NFU0 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
BEST4Q8NFU0 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BEST4Q8NFU0 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BEST4Q8NFU0 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.39□□□□□ -0.11
BEST4Q8NFU0 FAM220CP-201ENST00000395253 831 ntBASIC14.39□□□□□ -0.11
BEST4Q8NFU0 GUSBP12-201ENST00000513727 720 ntBASIC14.39□□□□□ -0.11
BEST4Q8NFU0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC14.39□□□□□ -0.11
BEST4Q8NFU0 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.39□□□□□ -0.11
BEST4Q8NFU0 RNF126P1-202ENST00000569893 925 ntBASIC14.39□□□□□ -0.11
BEST4Q8NFU0 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
BEST4Q8NFU0 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BEST4Q8NFU0 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BEST4Q8NFU0 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BEST4Q8NFU0 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BEST4Q8NFU0 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.39□□□□□ -0.11
BEST4Q8NFU0 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BEST4Q8NFU0 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.39□□□□□ -0.11
BEST4Q8NFU0 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.39□□□□□ -0.11
BEST4Q8NFU0 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms