Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC148Q8NFR7 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CCDC148Q8NFR7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CCDC148Q8NFR7 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC148Q8NFR7 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC148Q8NFR7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC148Q8NFR7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC148Q8NFR7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC148Q8NFR7 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC148Q8NFR7 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
CCDC148Q8NFR7 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC148Q8NFR7 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CCDC148Q8NFR7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CCDC148Q8NFR7 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.11■□□□□ 0.65
CCDC148Q8NFR7 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC148Q8NFR7 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CCDC148Q8NFR7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.11■□□□□ 0.65
CCDC148Q8NFR7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC148Q8NFR7 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CCDC148Q8NFR7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC148Q8NFR7 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.11■□□□□ 0.65
CCDC148Q8NFR7 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.11■□□□□ 0.65
CCDC148Q8NFR7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC148Q8NFR7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
CCDC148Q8NFR7 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC148Q8NFR7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.11■□□□□ 0.65
CCDC148Q8NFR7 C20orf181-201ENST00000623918 480 ntBASIC19.11■□□□□ 0.65
CCDC148Q8NFR7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CCDC148Q8NFR7 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC148Q8NFR7 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CCDC148Q8NFR7 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC148Q8NFR7 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC148Q8NFR7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CCDC148Q8NFR7 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC148Q8NFR7 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC148Q8NFR7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC148Q8NFR7 AC092171.3-201ENST00000610122 2651 ntBASIC19.1■□□□□ 0.65
CCDC148Q8NFR7 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC148Q8NFR7 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC148Q8NFR7 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC148Q8NFR7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.1■□□□□ 0.65
CCDC148Q8NFR7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CCDC148Q8NFR7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC148Q8NFR7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC148Q8NFR7 MKNK2P1-201ENST00000437526 628 ntBASIC19.1■□□□□ 0.65
CCDC148Q8NFR7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC148Q8NFR7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC148Q8NFR7 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC148Q8NFR7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.1■□□□□ 0.65
CCDC148Q8NFR7 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC148Q8NFR7 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.1■□□□□ 0.65
CCDC148Q8NFR7 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC148Q8NFR7 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
CCDC148Q8NFR7 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CCDC148Q8NFR7 AL139384.1-201ENST00000612143 3047 ntBASIC19.1■□□□□ 0.65
CCDC148Q8NFR7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC148Q8NFR7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC148Q8NFR7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC148Q8NFR7 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC148Q8NFR7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 AC099522.2-201ENST00000607001 744 ntBASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 AL078644.1-201ENST00000609881 752 ntBASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC148Q8NFR7 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms