Protein–RNA interactions for Protein: Q8NCT1

ARRDC4, Arrestin domain-containing protein 4, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC4Q8NCT1 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARRDC4Q8NCT1 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARRDC4Q8NCT1 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARRDC4Q8NCT1 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ARRDC4Q8NCT1 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.32■□□□□ 0.52
ARRDC4Q8NCT1 AC007389.4-201ENST00000454674 793 ntBASIC18.32■□□□□ 0.52
ARRDC4Q8NCT1 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ARRDC4Q8NCT1 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC18.32■□□□□ 0.52
ARRDC4Q8NCT1 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.32■□□□□ 0.52
ARRDC4Q8NCT1 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.32■□□□□ 0.52
ARRDC4Q8NCT1 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.32■□□□□ 0.52
ARRDC4Q8NCT1 AC004461.2-201ENST00000629517 803 ntBASIC18.32■□□□□ 0.52
ARRDC4Q8NCT1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARRDC4Q8NCT1 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ARRDC4Q8NCT1 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARRDC4Q8NCT1 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARRDC4Q8NCT1 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
ARRDC4Q8NCT1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ARRDC4Q8NCT1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.32■□□□□ 0.52
ARRDC4Q8NCT1 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ARRDC4Q8NCT1 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.32■□□□□ 0.52
ARRDC4Q8NCT1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.32■□□□□ 0.52
ARRDC4Q8NCT1 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ARRDC4Q8NCT1 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
ARRDC4Q8NCT1 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.32■□□□□ 0.52
ARRDC4Q8NCT1 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARRDC4Q8NCT1 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
ARRDC4Q8NCT1 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.32■□□□□ 0.52
ARRDC4Q8NCT1 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
ARRDC4Q8NCT1 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARRDC4Q8NCT1 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARRDC4Q8NCT1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARRDC4Q8NCT1 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 AC245100.3-201ENST00000441281 285 ntBASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 ELK1P1-201ENST00000485699 580 ntBASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 CTBP2P3-201ENST00000585629 1255 ntBASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 AC013467.2-201ENST00000605472 835 ntBASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 AC133552.6-201ENST00000613406 534 ntBASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 MIR6069-201ENST00000620069 79 ntBASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 AC006277.1-201ENST00000624348 1610 ntBASIC18.31■□□□□ 0.52
ARRDC4Q8NCT1 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARRDC4Q8NCT1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARRDC4Q8NCT1 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.3■□□□□ 0.52
ARRDC4Q8NCT1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARRDC4Q8NCT1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARRDC4Q8NCT1 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARRDC4Q8NCT1 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.3■□□□□ 0.52
ARRDC4Q8NCT1 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
ARRDC4Q8NCT1 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.3■□□□□ 0.52
ARRDC4Q8NCT1 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ARRDC4Q8NCT1 SPDYE17-201ENST00000412399 783 ntBASIC18.3■□□□□ 0.52
ARRDC4Q8NCT1 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.3■□□□□ 0.52
ARRDC4Q8NCT1 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.3■□□□□ 0.52
ARRDC4Q8NCT1 AC023310.3-201ENST00000557027 670 ntBASIC18.3■□□□□ 0.52
ARRDC4Q8NCT1 AC100756.1-201ENST00000562736 682 ntBASIC18.3■□□□□ 0.52
ARRDC4Q8NCT1 AC138749.3-201ENST00000567691 622 ntBASIC18.3■□□□□ 0.52
ARRDC4Q8NCT1 AC093726.1-201ENST00000608064 963 ntBASIC18.3■□□□□ 0.52
ARRDC4Q8NCT1 AC116165.1-201ENST00000611806 668 ntBASIC18.3■□□□□ 0.52
ARRDC4Q8NCT1 COX11-210ENST00000639671 696 ntBASIC18.3■□□□□ 0.52
ARRDC4Q8NCT1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ARRDC4Q8NCT1 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ARRDC4Q8NCT1 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.3■□□□□ 0.52
ARRDC4Q8NCT1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
ARRDC4Q8NCT1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
ARRDC4Q8NCT1 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.3■□□□□ 0.52
ARRDC4Q8NCT1 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
ARRDC4Q8NCT1 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms