Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 VILL-207ENST00000465644 1857 ntTSL 5 BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 AP005117.1-201ENST00000584346 1413 ntBASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 AC131009.4-201ENST00000624048 1740 ntBASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 FXN-203ENST00000396366 922 ntTSL 2 BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 LINC00265-3P-201ENST00000447588 903 ntBASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 AC074051.2-201ENST00000565115 352 ntBASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 AP002414.4-201ENST00000589764 1148 ntBASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 REXO1L3P-201ENST00000622202 1288 ntBASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 AC066615.1-201ENST00000640911 628 ntBASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 AL353732.1-201ENST00000569618 1459 ntBASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 AC022532.1-201ENST00000624563 1728 ntBASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 AC024909.3-201ENST00000611513 2257 ntBASIC11.18□□□□□ -0.62
LINC01561Q8N1V8 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 AL671710.1-201ENST00000610245 2349 ntBASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01561Q8N1V8 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms