Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 TSPY16P-201ENST00000449843 468 ntBASIC16.87■□□□□ 0.29
CHPFQ8IZ52 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.87■□□□□ 0.29
CHPFQ8IZ52 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 AC092053.1-201ENST00000605787 1936 ntBASIC16.87■□□□□ 0.29
CHPFQ8IZ52 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 AC236430.1-201ENST00000402231 743 ntBASIC16.86■□□□□ 0.29
CHPFQ8IZ52 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 AC142381.1-201ENST00000426099 345 ntBASIC16.86■□□□□ 0.29
CHPFQ8IZ52 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 TERF1P3-201ENST00000505638 1227 ntBASIC16.86■□□□□ 0.29
CHPFQ8IZ52 AC097493.3-201ENST00000509725 367 ntBASIC16.86■□□□□ 0.29
CHPFQ8IZ52 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CHPFQ8IZ52 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHPFQ8IZ52 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHPFQ8IZ52 NKILA-202ENST00000614771 2598 ntBASIC16.85■□□□□ 0.29
CHPFQ8IZ52 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHPFQ8IZ52 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHPFQ8IZ52 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHPFQ8IZ52 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHPFQ8IZ52 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHPFQ8IZ52 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHPFQ8IZ52 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHPFQ8IZ52 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.85■□□□□ 0.29
CHPFQ8IZ52 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHPFQ8IZ52 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.85■□□□□ 0.29
CHPFQ8IZ52 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHPFQ8IZ52 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHPFQ8IZ52 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.85■□□□□ 0.29
CHPFQ8IZ52 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHPFQ8IZ52 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHPFQ8IZ52 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms