Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 PMS2P4-201ENST00000412466 1052 ntBASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 TFAMP1-201ENST00000412727 736 ntBASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 AC109635.5-201ENST00000533593 962 ntBASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 AL513210.1-201ENST00000629608 234 ntBASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 AC105339.1-204ENST00000636249 355 ntBASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM48Q8IWZ4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 KRT18P28-201ENST00000453838 1332 ntBASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 METTL21AP1-201ENST00000438852 635 ntBASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 AP002490.2-201ENST00000524791 560 ntBASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 AL135744.1-201ENST00000565098 629 ntBASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.3■□□□□ 0.2
TRIM48Q8IWZ4 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 AKAP8P1-201ENST00000434743 1349 ntBASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms