Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RAB11FIP4Q86YS3 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB11FIP4Q86YS3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB11FIP4Q86YS3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.47■□□□□ 0.71
RAB11FIP4Q86YS3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB11FIP4Q86YS3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RAB11FIP4Q86YS3 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 GGT3P-204ENST00000453783 1664 ntBASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 TNRC18P3-201ENST00000441896 2691 ntBASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 AC040169.1-201ENST00000565382 521 ntBASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 AP002472.1-201ENST00000577490 586 ntBASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 AL139011.1-202ENST00000642063 584 ntBASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB11FIP4Q86YS3 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.45■□□□□ 0.7
RAB11FIP4Q86YS3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB11FIP4Q86YS3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB11FIP4Q86YS3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RAB11FIP4Q86YS3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAB11FIP4Q86YS3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB11FIP4Q86YS3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAB11FIP4Q86YS3 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.45■□□□□ 0.7
RAB11FIP4Q86YS3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.45■□□□□ 0.7
RAB11FIP4Q86YS3 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAB11FIP4Q86YS3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.45■□□□□ 0.7
RAB11FIP4Q86YS3 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
RAB11FIP4Q86YS3 HLA-J-202ENST00000469281 1241 ntBASIC19.45■□□□□ 0.7
RAB11FIP4Q86YS3 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAB11FIP4Q86YS3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
RAB11FIP4Q86YS3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.45■□□□□ 0.7
RAB11FIP4Q86YS3 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.45■□□□□ 0.7
RAB11FIP4Q86YS3 AL009183.1-201ENST00000603760 355 ntBASIC19.45■□□□□ 0.7
RAB11FIP4Q86YS3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB11FIP4Q86YS3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.45■□□□□ 0.7
RAB11FIP4Q86YS3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB11FIP4Q86YS3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB11FIP4Q86YS3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB11FIP4Q86YS3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.45■□□□□ 0.7
RAB11FIP4Q86YS3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB11FIP4Q86YS3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB11FIP4Q86YS3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RAB11FIP4Q86YS3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB11FIP4Q86YS3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAB11FIP4Q86YS3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB11FIP4Q86YS3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.44■□□□□ 0.7
RAB11FIP4Q86YS3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.44■□□□□ 0.7
RAB11FIP4Q86YS3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB11FIP4Q86YS3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RAB11FIP4Q86YS3 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB11FIP4Q86YS3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB11FIP4Q86YS3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB11FIP4Q86YS3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.44■□□□□ 0.7
RAB11FIP4Q86YS3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB11FIP4Q86YS3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RAB11FIP4Q86YS3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAB11FIP4Q86YS3 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB11FIP4Q86YS3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RAB11FIP4Q86YS3 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.44■□□□□ 0.7
RAB11FIP4Q86YS3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.44■□□□□ 0.7
RAB11FIP4Q86YS3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.44■□□□□ 0.7
RAB11FIP4Q86YS3 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.44■□□□□ 0.7
RAB11FIP4Q86YS3 FAM58CP-201ENST00000435741 640 ntBASIC19.44■□□□□ 0.7
RAB11FIP4Q86YS3 AC140658.5-201ENST00000438532 169 ntBASIC19.44■□□□□ 0.7
RAB11FIP4Q86YS3 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAB11FIP4Q86YS3 AC091812.2-201ENST00000619081 385 ntBASIC19.44■□□□□ 0.7
RAB11FIP4Q86YS3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms