Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM50Q86XT4 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 AP001094.4-201ENST00000579008 2176 ntBASIC18.43■□□□□ 0.54
TRIM50Q86XT4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 TSPY16P-201ENST00000449843 468 ntBASIC18.43■□□□□ 0.54
TRIM50Q86XT4 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 RN7SL204P-201ENST00000582831 262 ntBASIC18.43■□□□□ 0.54
TRIM50Q86XT4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.43■□□□□ 0.54
TRIM50Q86XT4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TRIM50Q86XT4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM50Q86XT4 AL603756.1-201ENST00000606511 2163 ntBASIC18.42■□□□□ 0.54
TRIM50Q86XT4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TRIM50Q86XT4 AC005915.1-201ENST00000624912 2018 ntBASIC18.42■□□□□ 0.54
TRIM50Q86XT4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.42■□□□□ 0.54
TRIM50Q86XT4 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM50Q86XT4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM50Q86XT4 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.42■□□□□ 0.54
TRIM50Q86XT4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM50Q86XT4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM50Q86XT4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM50Q86XT4 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM50Q86XT4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM50Q86XT4 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TRIM50Q86XT4 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM50Q86XT4 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM50Q86XT4 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM50Q86XT4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM50Q86XT4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM50Q86XT4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM50Q86XT4 HLA-H-201ENST00000383620 1096 ntBASIC18.42■□□□□ 0.54
TRIM50Q86XT4 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM50Q86XT4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
TRIM50Q86XT4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.42■□□□□ 0.54
TRIM50Q86XT4 AC002472.2-201ENST00000442739 958 ntBASIC18.42■□□□□ 0.54
TRIM50Q86XT4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.42■□□□□ 0.54
TRIM50Q86XT4 COX20P2-201ENST00000452636 358 ntBASIC18.42■□□□□ 0.54
TRIM50Q86XT4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM50Q86XT4 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TRIM50Q86XT4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms