Protein–RNA interactions for Protein: Q86WS4

C12orf40, Uncharacterized protein C12orf40, humanhuman

Predictions only

Length 652 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf40Q86WS4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf40Q86WS4 AL603756.1-201ENST00000606511 2163 ntBASIC16.79■□□□□ 0.28
C12orf40Q86WS4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf40Q86WS4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.79■□□□□ 0.28
C12orf40Q86WS4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf40Q86WS4 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf40Q86WS4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.79■□□□□ 0.28
C12orf40Q86WS4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf40Q86WS4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.79■□□□□ 0.28
C12orf40Q86WS4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf40Q86WS4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf40Q86WS4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf40Q86WS4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.79■□□□□ 0.28
C12orf40Q86WS4 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf40Q86WS4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.79■□□□□ 0.28
C12orf40Q86WS4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf40Q86WS4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf40Q86WS4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.79■□□□□ 0.28
C12orf40Q86WS4 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf40Q86WS4 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf40Q86WS4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf40Q86WS4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.79■□□□□ 0.28
C12orf40Q86WS4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
C12orf40Q86WS4 CRB3P1-201ENST00000449338 276 ntBASIC16.79■□□□□ 0.28
C12orf40Q86WS4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf40Q86WS4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
C12orf40Q86WS4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
C12orf40Q86WS4 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.79■□□□□ 0.28
C12orf40Q86WS4 AC009407.1-201ENST00000568958 598 ntBASIC16.79■□□□□ 0.28
C12orf40Q86WS4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.79■□□□□ 0.28
C12orf40Q86WS4 AC008738.7-201ENST00000609744 511 ntBASIC16.79■□□□□ 0.28
C12orf40Q86WS4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf40Q86WS4 CETN4P-206ENST00000642099 2168 ntBASIC16.79■□□□□ 0.28
C12orf40Q86WS4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf40Q86WS4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf40Q86WS4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
C12orf40Q86WS4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf40Q86WS4 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.79■□□□□ 0.28
C12orf40Q86WS4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C12orf40Q86WS4 GGT4P-201ENST00000623672 1708 ntBASIC16.79■□□□□ 0.28
C12orf40Q86WS4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf40Q86WS4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf40Q86WS4 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf40Q86WS4 PCDHB18P-201ENST00000524813 2368 ntBASIC16.78■□□□□ 0.28
C12orf40Q86WS4 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf40Q86WS4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf40Q86WS4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
C12orf40Q86WS4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
C12orf40Q86WS4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf40Q86WS4 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf40Q86WS4 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
C12orf40Q86WS4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf40Q86WS4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf40Q86WS4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf40Q86WS4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf40Q86WS4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf40Q86WS4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.78■□□□□ 0.28
C12orf40Q86WS4 AC005225.4-201ENST00000557330 545 ntBASIC16.78■□□□□ 0.28
C12orf40Q86WS4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf40Q86WS4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
C12orf40Q86WS4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.78■□□□□ 0.28
C12orf40Q86WS4 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.78■□□□□ 0.28
C12orf40Q86WS4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.78■□□□□ 0.28
C12orf40Q86WS4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.78■□□□□ 0.28
C12orf40Q86WS4 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf40Q86WS4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
C12orf40Q86WS4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf40Q86WS4 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.78■□□□□ 0.28
C12orf40Q86WS4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf40Q86WS4 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.78■□□□□ 0.28
C12orf40Q86WS4 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf40Q86WS4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.78■□□□□ 0.28
C12orf40Q86WS4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.78■□□□□ 0.28
C12orf40Q86WS4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf40Q86WS4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
C12orf40Q86WS4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.78■□□□□ 0.28
C12orf40Q86WS4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
C12orf40Q86WS4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
C12orf40Q86WS4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
C12orf40Q86WS4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
C12orf40Q86WS4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
C12orf40Q86WS4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
C12orf40Q86WS4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
C12orf40Q86WS4 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
C12orf40Q86WS4 GPAA1P2-202ENST00000606848 1787 ntBASIC16.77■□□□□ 0.28
C12orf40Q86WS4 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
C12orf40Q86WS4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
C12orf40Q86WS4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
C12orf40Q86WS4 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
C12orf40Q86WS4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
C12orf40Q86WS4 AL080243.2-201ENST00000418783 582 ntBASIC16.77■□□□□ 0.28
C12orf40Q86WS4 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
C12orf40Q86WS4 AP002490.2-201ENST00000524791 560 ntBASIC16.77■□□□□ 0.28
C12orf40Q86WS4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.77■□□□□ 0.28
C12orf40Q86WS4 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.77■□□□□ 0.28
C12orf40Q86WS4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
C12orf40Q86WS4 AC009118.2-201ENST00000613275 655 ntBASIC16.77■□□□□ 0.28
C12orf40Q86WS4 AC005332.8-201ENST00000622750 2735 ntBASIC16.77■□□□□ 0.28
C12orf40Q86WS4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.77■□□□□ 0.28
C12orf40Q86WS4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms