Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 ABCD1P5-201ENST00000445663 754 ntBASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 DUX4L26-201ENST00000489078 1255 ntBASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 TPSP2-201ENST00000561760 610 ntBASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM1Q86UE6 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 PCGF3-213ENST00000620529 1899 ntBASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 LINC01144-201ENST00000626198 1710 ntBASIC14.44□□□□□ -0.1
LRRTM1Q86UE6 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms