Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.85□□□□□ -0.19
ZNF546Q86UE3 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
ZNF546Q86UE3 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
ZNF546Q86UE3 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF546Q86UE3 SSR4P1-203ENST00000599569 2260 ntBASIC13.85□□□□□ -0.19
ZNF546Q86UE3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF546Q86UE3 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF546Q86UE3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC13.85□□□□□ -0.19
ZNF546Q86UE3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF546Q86UE3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.85□□□□□ -0.19
ZNF546Q86UE3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.85□□□□□ -0.19
ZNF546Q86UE3 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
ZNF546Q86UE3 AC007292.2-201ENST00000593524 1812 ntBASIC13.85□□□□□ -0.19
ZNF546Q86UE3 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
ZNF546Q86UE3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC13.85□□□□□ -0.19
ZNF546Q86UE3 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF546Q86UE3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF546Q86UE3 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.85□□□□□ -0.19
ZNF546Q86UE3 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.85□□□□□ -0.19
ZNF546Q86UE3 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
ZNF546Q86UE3 CICP24-201ENST00000605464 2705 ntBASIC13.84□□□□□ -0.19
ZNF546Q86UE3 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF546Q86UE3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF546Q86UE3 CDC14C-201ENST00000428251 1719 ntBASIC13.84□□□□□ -0.19
ZNF546Q86UE3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
ZNF546Q86UE3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF546Q86UE3 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
ZNF546Q86UE3 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF546Q86UE3 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.84□□□□□ -0.19
ZNF546Q86UE3 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
ZNF546Q86UE3 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
ZNF546Q86UE3 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF546Q86UE3 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF546Q86UE3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF546Q86UE3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF546Q86UE3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF546Q86UE3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF546Q86UE3 AP000523.1-201ENST00000398242 1049 ntBASIC13.84□□□□□ -0.19
ZNF546Q86UE3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF546Q86UE3 AC096633.1-201ENST00000422446 749 ntBASIC13.84□□□□□ -0.19
ZNF546Q86UE3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC13.84□□□□□ -0.19
ZNF546Q86UE3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC13.84□□□□□ -0.19
ZNF546Q86UE3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC13.84□□□□□ -0.19
ZNF546Q86UE3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF546Q86UE3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC13.84□□□□□ -0.19
ZNF546Q86UE3 NEK4P2-201ENST00000580004 1012 ntBASIC13.84□□□□□ -0.19
ZNF546Q86UE3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC13.84□□□□□ -0.19
ZNF546Q86UE3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC13.84□□□□□ -0.19
ZNF546Q86UE3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC13.84□□□□□ -0.19
ZNF546Q86UE3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.84□□□□□ -0.19
ZNF546Q86UE3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.84□□□□□ -0.19
ZNF546Q86UE3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF546Q86UE3 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF546Q86UE3 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
ZNF546Q86UE3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF546Q86UE3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF546Q86UE3 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
ZNF546Q86UE3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF546Q86UE3 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF546Q86UE3 LINC02447-202ENST00000501888 2146 ntBASIC13.84□□□□□ -0.19
ZNF546Q86UE3 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF546Q86UE3 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.84□□□□□ -0.19
ZNF546Q86UE3 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF546Q86UE3 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
ZNF546Q86UE3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC13.83□□□□□ -0.19
ZNF546Q86UE3 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
ZNF546Q86UE3 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
ZNF546Q86UE3 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
ZNF546Q86UE3 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
ZNF546Q86UE3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 COX5BP2-201ENST00000392354 334 ntBASIC13.83□□□□□ -0.2
ZNF546Q86UE3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 AC128688.1-201ENST00000487626 519 ntBASIC13.83□□□□□ -0.2
ZNF546Q86UE3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 MIR4785-201ENST00000585005 73 ntBASIC13.83□□□□□ -0.2
ZNF546Q86UE3 AP000525.1-201ENST00000608286 694 ntBASIC13.83□□□□□ -0.2
ZNF546Q86UE3 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.83□□□□□ -0.2
ZNF546Q86UE3 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms